Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC5Q00444 OR52A4P-203ENST00000498233 1014 ntBASIC2.43□□□□□ -2.02
HOXC5Q00444 AC008565.1-201ENST00000509046 885 ntBASIC2.43□□□□□ -2.02
HOXC5Q00444 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC5Q00444 RNU6-711P-201ENST00000517255 106 ntBASIC2.43□□□□□ -2.02
HOXC5Q00444 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXC5Q00444 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.43□□□□□ -2.02
HOXC5Q00444 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC5Q00444 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC5Q00444 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.43□□□□□ -2.02
HOXC5Q00444 BNIP3P33-201ENST00000598912 569 ntBASIC2.43□□□□□ -2.02
HOXC5Q00444 AC096947.1-201ENST00000603233 470 ntBASIC2.43□□□□□ -2.02
HOXC5Q00444 AC135178.6-201ENST00000605314 398 ntBASIC2.43□□□□□ -2.02
HOXC5Q00444 AC093732.2-201ENST00000607950 274 ntBASIC2.43□□□□□ -2.02
HOXC5Q00444 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC5Q00444 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HOXC5Q00444 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HOXC5Q00444 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC5Q00444 AP002907.1-201ENST00000606361 1430 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC5Q00444 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC5Q00444 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 RNU6-543P-201ENST00000362576 108 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC5Q00444 RNA5SP21-201ENST00000410917 96 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 RAP1BP1-201ENST00000412709 553 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC5Q00444 RAD23BP2-201ENST00000416003 1207 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC005189.1-201ENST00000431286 310 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC5Q00444 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC008280.2-201ENST00000455473 307 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 RPL23AP31-201ENST00000456160 467 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC5Q00444 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC5Q00444 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC026412.2-201ENST00000512270 1075 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 RN7SKP132-201ENST00000516001 208 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 RNU1-61P-201ENST00000516107 151 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 SNORA31.21-201ENST00000517180 77 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 CKS1BP7-201ENST00000522230 235 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC128657.1-201ENST00000549459 145 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC012414.2-201ENST00000559474 187 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC5Q00444 TPMTP1-201ENST00000592307 737 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AC113368.1-201ENST00000603736 382 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AC079610.2-201ENST00000604818 690 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 HSPE1P14-201ENST00000605812 302 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AL137847.3-201ENST00000611521 109 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 AC068831.7-201ENST00000616954 363 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC5Q00444 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC5Q00444 AL356118.1-201ENST00000635272 1078 ntBASIC2.42□□□□□ -2.02
HOXC5Q00444 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXC5Q00444 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC5Q00444 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC5Q00444 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC5Q00444 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC5Q00444 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
HOXC5Q00444 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
HOXC5Q00444 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXC5Q00444 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC5Q00444 SNORD21-201ENST00000383953 95 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 MIR491-201ENST00000384877 84 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HOXC5Q00444 RNU6-837P-201ENST00000391056 108 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 RNU2-17P-201ENST00000410290 190 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 USP9YP20-201ENST00000419224 558 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC5Q00444 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC5Q00444 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC5Q00444 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC5Q00444 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC5Q00444 RPS24P13-201ENST00000442520 397 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 RPS3AP12-201ENST00000443616 753 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.41□□□□□ -2.02
HOXC5Q00444 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 AC010301.1-201ENST00000473936 355 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 OR9N1P-202ENST00000494289 481 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 RNA5SP367-201ENST00000516557 118 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.41□□□□□ -2.02
HOXC5Q00444 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC5Q00444 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.41□□□□□ -2.02
HOXC5Q00444 OR7K1P-201ENST00000546439 926 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 AC123904.3-201ENST00000547218 814 ntBASIC2.41□□□□□ -2.02
HOXC5Q00444 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.41□□□□□ -2.02
HOXC5Q00444 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
HOXC5Q00444 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.41□□□□□ -2.02
HOXC5Q00444 MIR3200-201ENST00000580767 85 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms