Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HERVK_113P62684 AL590609.2-201ENST00000421430 368 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.05□□□□□ -1.6
HERVK_113P62684 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.05□□□□□ -1.6
HERVK_113P62684 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HERVK_113P62684 AL117339.2-201ENST00000430475 180 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AC098614.3-201ENST00000438957 440 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.05□□□□□ -1.6
HERVK_113P62684 FAM103A2P-201ENST00000444122 354 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.05□□□□□ -1.6
HERVK_113P62684 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.05□□□□□ -1.6
HERVK_113P62684 STMN1P2-201ENST00000508435 439 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.05□□□□□ -1.6
HERVK_113P62684 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.05□□□□□ -1.6
HERVK_113P62684 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.05□□□□□ -1.6
HERVK_113P62684 AL157687.1-201ENST00000554853 619 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.05□□□□□ -1.6
HERVK_113P62684 AC025678.1-201ENST00000567861 338 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.05□□□□□ -1.6
HERVK_113P62684 MIR4429-201ENST00000580105 73 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 BNIP3P22-201ENST00000593399 556 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AL161729.3-201ENST00000603533 673 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AC012507.3-201ENST00000603556 477 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERVK_113P62684 AC007363.1-201ENST00000604736 620 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AL390208.1-201ENST00000605885 644 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 MIR98-201ENST00000606724 119 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERVK_113P62684 AL020991.1-201ENST00000612314 373 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AL133173.2-201ENST00000614270 90 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 AC010149.2-201ENST00000637608 315 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.05□□□□□ -1.6
HERVK_113P62684 AC097504.1-201ENST00000515103 2415 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HERVK_113P62684 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.05□□□□□ -1.6
HERVK_113P62684 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.05□□□□□ -1.6
HERVK_113P62684 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HERVK_113P62684 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.04□□□□□ -1.6
HERVK_113P62684 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.04□□□□□ -1.6
HERVK_113P62684 Y_RNA.46-201ENST00000362695 102 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 RNU6-343P-201ENST00000364709 104 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 RNU6-877P-201ENST00000383868 107 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 RNU6-1293P-201ENST00000384077 107 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 RNA5SP146-201ENST00000410743 123 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 RNU6-603P-201ENST00000411403 107 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.04□□□□□ -1.6
HERVK_113P62684 AC012498.1-201ENST00000424037 437 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.04□□□□□ -1.6
HERVK_113P62684 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.04□□□□□ -1.6
HERVK_113P62684 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.04□□□□□ -1.6
HERVK_113P62684 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.04□□□□□ -1.6
HERVK_113P62684 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 USP9YP8-201ENST00000441913 500 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 HSPE1P28-201ENST00000443139 211 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 RPS26P56-201ENST00000444468 240 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AC005297.2-201ENST00000450430 606 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 RPS20P32-201ENST00000456044 356 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AC087879.1-201ENST00000474343 374 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AC005726.1-201ENST00000494679 427 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.04□□□□□ -1.6
HERVK_113P62684 RNU6-358P-201ENST00000516564 75 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 RNU6-714P-201ENST00000516963 103 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AC107918.3-201ENST00000533272 382 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.04□□□□□ -1.6
HERVK_113P62684 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 AC008752.3-201ENST00000588113 712 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AC055876.5-201ENST00000605667 259 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 AL445264.1-201ENST00000621719 171 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 RNU6-156P-201ENST00000621869 107 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AC000123.2-201ENST00000623124 461 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AC139792.3-201ENST00000623525 224 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.04□□□□□ -1.6
HERVK_113P62684 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
HERVK_113P62684 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
HERVK_113P62684 AP000542.2-201ENST00000623199 6179 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HERVK_113P62684 AL049780.3-201ENST00000624612 1583 ntBASIC5.04□□□□□ -1.6
HERVK_113P62684 KPNA2P2-201ENST00000419546 1489 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 AC024560.2-201ENST00000507981 1497 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 RNU6-483P-201ENST00000384088 108 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 RPL7P25-201ENST00000404151 721 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 HDGFP1-201ENST00000405943 252 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 RNA5SP296-201ENST00000410523 111 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 AL359704.1-201ENST00000411586 781 ntBASIC5.03□□□□□ -1.6
HERVK_113P62684 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms