Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.56□□□□□ -2
ACTBP60709 AC083923.1-201ENST00000523708 376 ntBASIC2.56□□□□□ -2
ACTBP60709 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.56□□□□□ -2
ACTBP60709 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.56□□□□□ -2
ACTBP60709 EIF5A2P1-201ENST00000564027 460 ntBASIC2.56□□□□□ -2
ACTBP60709 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.56□□□□□ -2
ACTBP60709 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.56□□□□□ -2
ACTBP60709 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.56□□□□□ -2
ACTBP60709 MIR6733-201ENST00000635723 61 ntBASIC2.56□□□□□ -2
ACTBP60709 MTND5P1-201ENST00000445440 1375 ntBASIC2.56□□□□□ -2
ACTBP60709 AC244517.1-201ENST00000606030 2086 ntBASIC2.56□□□□□ -2
ACTBP60709 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
ACTBP60709 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.55□□□□□ -2
ACTBP60709 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
ACTBP60709 Y_RNA.333-201ENST00000365274 102 ntBASIC2.55□□□□□ -2
ACTBP60709 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.55□□□□□ -2
ACTBP60709 RNU6-1226P-201ENST00000384317 107 ntBASIC2.55□□□□□ -2
ACTBP60709 MIR627-201ENST00000384979 97 ntBASIC2.55□□□□□ -2
ACTBP60709 MIR23A-201ENST00000385245 73 ntBASIC2.55□□□□□ -2
ACTBP60709 AL139095.1-201ENST00000404326 391 ntBASIC2.55□□□□□ -2
ACTBP60709 AL590004.2-201ENST00000404787 371 ntBASIC2.55□□□□□ -2
ACTBP60709 AL589655.1-201ENST00000405398 482 ntBASIC2.55□□□□□ -2
ACTBP60709 RPS3AP25-201ENST00000411660 793 ntBASIC2.55□□□□□ -2
ACTBP60709 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.55□□□□□ -2
ACTBP60709 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.55□□□□□ -2
ACTBP60709 KRR1P1-201ENST00000419430 803 ntBASIC2.55□□□□□ -2
ACTBP60709 AC099677.1-201ENST00000420575 175 ntBASIC2.55□□□□□ -2
ACTBP60709 AC005300.1-201ENST00000428401 373 ntBASIC2.55□□□□□ -2
ACTBP60709 AC005326.1-201ENST00000429197 123 ntBASIC2.55□□□□□ -2
ACTBP60709 SUMO1P4-201ENST00000429430 302 ntBASIC2.55□□□□□ -2
ACTBP60709 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.55□□□□□ -2
ACTBP60709 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ACTBP60709 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.55□□□□□ -2
ACTBP60709 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.55□□□□□ -2
ACTBP60709 BTF3P5-201ENST00000457252 467 ntBASIC2.55□□□□□ -2
ACTBP60709 snoU13.22-201ENST00000459428 104 ntBASIC2.55□□□□□ -2
ACTBP60709 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.55□□□□□ -2
ACTBP60709 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.55□□□□□ -2
ACTBP60709 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.55□□□□□ -2
ACTBP60709 OR9N1P-202ENST00000494289 481 ntBASIC2.55□□□□□ -2
ACTBP60709 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.55□□□□□ -2
ACTBP60709 FAM35BP-202ENST00000497389 3337 ntBASIC2.55□□□□□ -2
ACTBP60709 OR5H5P-201ENST00000503164 928 ntBASIC2.55□□□□□ -2
ACTBP60709 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.55□□□□□ -2
ACTBP60709 AC074250.1-201ENST00000511117 192 ntBASIC2.55□□□□□ -2
ACTBP60709 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.55□□□□□ -2
ACTBP60709 RAC1P5-201ENST00000512182 576 ntBASIC2.55□□□□□ -2
ACTBP60709 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.55□□□□□ -2
ACTBP60709 RN7SKP40-201ENST00000517211 242 ntBASIC2.55□□□□□ -2
ACTBP60709 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.55□□□□□ -2
ACTBP60709 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.55□□□□□ -2
ACTBP60709 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.55□□□□□ -2
ACTBP60709 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.55□□□□□ -2
ACTBP60709 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.55□□□□□ -2
ACTBP60709 AC079880.2-201ENST00000603790 1213 ntBASIC2.55□□□□□ -2
ACTBP60709 AL137843.1-201ENST00000605078 385 ntBASIC2.55□□□□□ -2
ACTBP60709 AC024560.3-201ENST00000608482 349 ntBASIC2.55□□□□□ -2
ACTBP60709 AC106028.5-201ENST00000610332 395 ntBASIC2.55□□□□□ -2
ACTBP60709 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.55□□□□□ -2
ACTBP60709 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.55□□□□□ -2
ACTBP60709 AC099506.2-201ENST00000623074 221 ntBASIC2.55□□□□□ -2
ACTBP60709 AC006378.2-201ENST00000623178 2476 ntBASIC2.55□□□□□ -2
ACTBP60709 AC090617.9-201ENST00000623751 147 ntBASIC2.55□□□□□ -2
ACTBP60709 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.55□□□□□ -2
ACTBP60709 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
ACTBP60709 AL035425.3-201ENST00000564206 4996 ntBASIC2.54□□□□□ -2
ACTBP60709 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.54□□□□□ -2
ACTBP60709 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.54□□□□□ -2
ACTBP60709 AC073325.2-201ENST00000339545 159 ntBASIC2.54□□□□□ -2
ACTBP60709 OR5H2-201ENST00000355273 945 ntBASIC2.54□□□□□ -2
ACTBP60709 RNA5SP267-201ENST00000364893 126 ntBASIC2.54□□□□□ -2
ACTBP60709 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.54□□□□□ -2
ACTBP60709 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
ACTBP60709 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.54□□□□□ -2
ACTBP60709 RNU6-821P-201ENST00000390995 107 ntBASIC2.54□□□□□ -2
ACTBP60709 U3.42-201ENST00000408746 214 ntBASIC2.54□□□□□ -2
ACTBP60709 AC092745.2-202ENST00000411880 369 ntBASIC2.54□□□□□ -2
ACTBP60709 HMGB3P31-201ENST00000413333 595 ntBASIC2.54□□□□□ -2
ACTBP60709 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.54□□□□□ -2
ACTBP60709 TATDN1P1-201ENST00000414123 891 ntBASIC2.54□□□□□ -2
ACTBP60709 AL158156.1-201ENST00000422509 473 ntBASIC2.54□□□□□ -2
ACTBP60709 AC114973.1-201ENST00000429057 632 ntBASIC2.54□□□□□ -2
ACTBP60709 ZNF965P-201ENST00000432501 817 ntBASIC2.54□□□□□ -2
ACTBP60709 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.54□□□□□ -2
ACTBP60709 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.54□□□□□ -2
ACTBP60709 AC008571.1-201ENST00000467232 300 ntBASIC2.54□□□□□ -2
ACTBP60709 AC109925.1-201ENST00000478069 331 ntBASIC2.54□□□□□ -2
ACTBP60709 AC015724.1-201ENST00000478577 156 ntBASIC2.54□□□□□ -2
ACTBP60709 AC096751.1-202ENST00000502691 1067 ntBASIC2.54□□□□□ -2
ACTBP60709 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.54□□□□□ -2
ACTBP60709 SNORA9.3-201ENST00000516383 129 ntBASIC2.54□□□□□ -2
ACTBP60709 RNU6-826P-201ENST00000516827 104 ntBASIC2.54□□□□□ -2
ACTBP60709 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.54□□□□□ -2
ACTBP60709 AP000857.1-201ENST00000532151 543 ntBASIC2.54□□□□□ -2
ACTBP60709 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.54□□□□□ -2
ACTBP60709 ELOCP31-201ENST00000540463 467 ntBASIC2.54□□□□□ -2
ACTBP60709 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
ACTBP60709 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.54□□□□□ -2
ACTBP60709 MIR5680-201ENST00000577577 84 ntBASIC2.54□□□□□ -2
ACTBP60709 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms