Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 MIR1321-201ENST00000637766 79 ntBASIC3.51□□□□□ -1.85
ERVFC1-1P60608 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ERVFC1-1P60608 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ERVFC1-1P60608 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.51□□□□□ -1.85
ERVFC1-1P60608 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ERVFC1-1P60608 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ERVFC1-1P60608 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ERVFC1-1P60608 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 OR5J1P-201ENST00000313544 939 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 Y_RNA.61-201ENST00000362835 102 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RNU6-761P-201ENST00000384148 107 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RNU1-106P-201ENST00000384382 164 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AL590762.2-201ENST00000395798 571 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC016769.3-201ENST00000396562 315 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RPL7P25-201ENST00000404151 721 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 Z98941.1-201ENST00000407764 100 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RN7SKP167-201ENST00000411047 285 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RPS23P10-201ENST00000416185 486 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AF186996.5-201ENST00000418098 904 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 DDX39BP1-205ENST00000422507 192 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RPL31P35-201ENST00000431058 377 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 MTCO2P11-201ENST00000431069 680 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 ARPC3P1-201ENST00000437218 533 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 MTND4LP16-201ENST00000440828 295 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AP000893.1-201ENST00000474462 794 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC090453.1-201ENST00000495560 436 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC114967.1-201ENST00000504890 259 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 COX6B1P5-201ENST00000509843 249 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC046134.1-201ENST00000514454 666 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RNU6-875P-201ENST00000516488 106 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RN7SKP147-201ENST00000517154 244 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 HSPA8P13-201ENST00000523715 472 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 TOMM20P2-201ENST00000540082 421 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RAB11AP2-201ENST00000545905 639 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC107954.1-201ENST00000565906 727 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 MIR4700-201ENST00000578311 74 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 NRBF2P1-201ENST00000587407 859 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC011447.4-201ENST00000587562 111 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC008752.3-201ENST00000588113 712 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AL359999.1-201ENST00000604513 294 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AL034351.1-201ENST00000605288 668 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AL390208.1-201ENST00000605885 644 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AL158211.4-201ENST00000606988 584 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC011816.2-201ENST00000607089 556 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AL020991.1-201ENST00000612314 373 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AL445264.1-201ENST00000621719 171 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AP001784.1-201ENST00000624107 428 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 MTND4P29-201ENST00000503122 1372 ntBASIC3.5□□□□□ -1.85
ERVFC1-1P60608 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.5□□□□□ -1.85
ERVFC1-1P60608 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.49□□□□□ -1.85
ERVFC1-1P60608 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ERVFC1-1P60608 AC007529.1-201ENST00000418574 2178 ntBASIC3.49□□□□□ -1.85
ERVFC1-1P60608 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
ERVFC1-1P60608 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.49□□□□□ -1.85
ERVFC1-1P60608 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ERVFC1-1P60608 Y_RNA.46-201ENST00000362695 102 ntBASIC3.49□□□□□ -1.85
ERVFC1-1P60608 RNU6-181P-201ENST00000363225 107 ntBASIC3.49□□□□□ -1.85
ERVFC1-1P60608 RNU6-1293P-201ENST00000384077 107 ntBASIC3.49□□□□□ -1.85
ERVFC1-1P60608 RNU6-483P-201ENST00000384088 108 ntBASIC3.49□□□□□ -1.85
ERVFC1-1P60608 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms