Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC016877.3-201ENST00000606778 504 ntBASIC3.27□□□□□ -1.89
CASP4P49662 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.27□□□□□ -1.89
CASP4P49662 AC018926.1-201ENST00000616335 435 ntBASIC3.27□□□□□ -1.89
CASP4P49662 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.27□□□□□ -1.89
CASP4P49662 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CASP4P49662 AL355596.1-201ENST00000565399 3996 ntBASIC3.27□□□□□ -1.89
CASP4P49662 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CASP4P49662 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
CASP4P49662 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CASP4P49662 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.26□□□□□ -1.89
CASP4P49662 RNA5SP274-201ENST00000410484 108 ntBASIC3.26□□□□□ -1.89
CASP4P49662 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.26□□□□□ -1.89
CASP4P49662 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.26□□□□□ -1.89
CASP4P49662 FO393414.1-201ENST00000428697 1184 ntBASIC3.26□□□□□ -1.89
CASP4P49662 MTCYBP15-201ENST00000433123 1127 ntBASIC3.26□□□□□ -1.89
CASP4P49662 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.26□□□□□ -1.89
CASP4P49662 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.26□□□□□ -1.89
CASP4P49662 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.26□□□□□ -1.89
CASP4P49662 MTCO3P2-201ENST00000457365 171 ntBASIC3.26□□□□□ -1.89
CASP4P49662 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.26□□□□□ -1.89
CASP4P49662 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.26□□□□□ -1.89
CASP4P49662 RN7SL633P-201ENST00000488974 297 ntBASIC3.26□□□□□ -1.89
CASP4P49662 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.26□□□□□ -1.89
CASP4P49662 AC074050.1-201ENST00000563247 211 ntBASIC3.26□□□□□ -1.89
CASP4P49662 AC093519.1-201ENST00000566109 298 ntBASIC3.26□□□□□ -1.89
CASP4P49662 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CASP4P49662 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CASP4P49662 AC006539.2-201ENST00000601729 572 ntBASIC3.26□□□□□ -1.89
CASP4P49662 GAS5-AS1-201ENST00000602767 694 ntBASIC3.26□□□□□ -1.89
CASP4P49662 AL161756.2-201ENST00000604597 246 ntBASIC3.26□□□□□ -1.89
CASP4P49662 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.26□□□□□ -1.89
CASP4P49662 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.26□□□□□ -1.89
CASP4P49662 AC073968.1-201ENST00000618594 637 ntBASIC3.26□□□□□ -1.89
CASP4P49662 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.26□□□□□ -1.89
CASP4P49662 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.26□□□□□ -1.89
CASP4P49662 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.26□□□□□ -1.89
CASP4P49662 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CASP4P49662 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.26□□□□□ -1.89
CASP4P49662 OR5BR1P-201ENST00000524992 1330 ntBASIC3.25□□□□□ -1.89
CASP4P49662 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.25□□□□□ -1.89
CASP4P49662 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CASP4P49662 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CASP4P49662 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
CASP4P49662 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.25□□□□□ -1.89
CASP4P49662 RNU6-730P-201ENST00000383954 104 ntBASIC3.25□□□□□ -1.89
CASP4P49662 RNU6-629P-201ENST00000384061 103 ntBASIC3.25□□□□□ -1.89
CASP4P49662 RNU6-821P-201ENST00000390995 107 ntBASIC3.25□□□□□ -1.89
CASP4P49662 MTND4LP20-201ENST00000402379 270 ntBASIC3.25□□□□□ -1.89
CASP4P49662 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.25□□□□□ -1.89
CASP4P49662 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.25□□□□□ -1.89
CASP4P49662 DUTP6-201ENST00000425573 462 ntBASIC3.25□□□□□ -1.89
CASP4P49662 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.25□□□□□ -1.89
CASP4P49662 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.25□□□□□ -1.89
CASP4P49662 RPS7P2-201ENST00000435134 607 ntBASIC3.25□□□□□ -1.89
CASP4P49662 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.25□□□□□ -1.89
CASP4P49662 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.25□□□□□ -1.89
CASP4P49662 snoU13.24-201ENST00000458998 104 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AP001992.1-205ENST00000462248 379 ntBASIC3.25□□□□□ -1.89
CASP4P49662 RPL21P18-201ENST00000469899 480 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AC010285.1-201ENST00000470580 392 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AC010301.1-201ENST00000473936 355 ntBASIC3.25□□□□□ -1.89
CASP4P49662 GAPDHP39-201ENST00000481866 979 ntBASIC3.25□□□□□ -1.89
CASP4P49662 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.25□□□□□ -1.89
CASP4P49662 AL024509.2-201ENST00000493462 493 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AC026414.1-201ENST00000504046 698 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AC098799.1-201ENST00000504752 800 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
CASP4P49662 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.25□□□□□ -1.89
CASP4P49662 MTCO2P32-201ENST00000514865 403 ntBASIC3.25□□□□□ -1.89
CASP4P49662 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.25□□□□□ -1.89
CASP4P49662 RN7SKP43-201ENST00000516173 320 ntBASIC3.25□□□□□ -1.89
CASP4P49662 RNA5SP341-201ENST00000516261 117 ntBASIC3.25□□□□□ -1.89
CASP4P49662 SNORA31.20-201ENST00000517111 133 ntBASIC3.25□□□□□ -1.89
CASP4P49662 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.25□□□□□ -1.89
CASP4P49662 PSMA2P1-201ENST00000526365 646 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AP000790.1-201ENST00000528891 737 ntBASIC3.25□□□□□ -1.89
CASP4P49662 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.25□□□□□ -1.89
CASP4P49662 MIR4666A-201ENST00000580160 79 ntBASIC3.25□□□□□ -1.89
CASP4P49662 SNORD39.3-201ENST00000584451 71 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AL158211.2-201ENST00000607282 395 ntBASIC3.25□□□□□ -1.89
CASP4P49662 AP000943.4-201ENST00000622912 357 ntBASIC3.25□□□□□ -1.89
CASP4P49662 MTND2P41-201ENST00000637599 773 ntBASIC3.25□□□□□ -1.89
CASP4P49662 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.25□□□□□ -1.89
CASP4P49662 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CASP4P49662 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CASP4P49662 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CASP4P49662 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CASP4P49662 AC002546.1-201ENST00000588041 2504 ntBASIC3.24□□□□□ -1.89
CASP4P49662 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CASP4P49662 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CASP4P49662 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.24□□□□□ -1.89
CASP4P49662 MIR422A-201ENST00000362286 90 ntBASIC3.24□□□□□ -1.89
CASP4P49662 RNA5SP258-201ENST00000362750 119 ntBASIC3.24□□□□□ -1.89
CASP4P49662 RNU6-582P-201ENST00000362989 107 ntBASIC3.24□□□□□ -1.89
CASP4P49662 RNU5B-1-201ENST00000363286 116 ntBASIC3.24□□□□□ -1.89
CASP4P49662 RNU6-839P-201ENST00000363347 108 ntBASIC3.24□□□□□ -1.89
CASP4P49662 SNORA71.1-201ENST00000364523 117 ntBASIC3.24□□□□□ -1.89
CASP4P49662 SNORD116-23-201ENST00000384645 92 ntBASIC3.24□□□□□ -1.89
CASP4P49662 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms