Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD13P35453 TXNP6-201ENST00000510190 310 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 RANP9-201ENST00000519957 271 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD13P35453 OR6C7P-201ENST00000547875 934 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD13P35453 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD13P35453 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD13P35453 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXD13P35453 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXD13P35453 AL596327.1-201ENST00000603629 213 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 AC006077.1-201ENST00000604746 343 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 RNU6-88P-201ENST00000606801 100 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXD13P35453 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXD13P35453 TUG1_1.1-201ENST00000610654 145 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 AL136981.2-201ENST00000617319 734 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 AC015967.1-201ENST00000619893 476 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 AC012442.3-202ENST00000636742 206 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HOXD13P35453 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
HOXD13P35453 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXD13P35453 EXOC5P1-201ENST00000510543 1969 ntBASIC3.96□□□□□ -1.78
HOXD13P35453 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD13P35453 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD13P35453 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXD13P35453 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXD13P35453 ZNF285B-201ENST00000561698 1767 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD13P35453 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD13P35453 AC066616.2-201ENST00000559334 1481 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD13P35453 SNORA73.2-201ENST00000364946 201 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 MIR134-201ENST00000385258 73 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 RPL21P17-201ENST00000397467 475 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 AL590704.1-201ENST00000402856 794 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 RNU2-47P-201ENST00000410649 186 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD13P35453 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD13P35453 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD13P35453 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXD13P35453 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD13P35453 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD13P35453 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXD13P35453 AL353691.1-201ENST00000451332 387 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 RPL31P50-201ENST00000471002 296 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 ACTR3P3-201ENST00000480448 893 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 AC024589.1-201ENST00000512207 263 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXD13P35453 RN7SKP289-201ENST00000517244 295 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 AC103783.1-201ENST00000520506 373 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXD13P35453 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXD13P35453 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXD13P35453 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD13P35453 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXD13P35453 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXD13P35453 MIR4738-201ENST00000579134 87 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 AP001029.3-201ENST00000588063 596 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 AC093227.2-201ENST00000589357 285 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 BNIP3P38-201ENST00000601117 544 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 AL031281.1-201ENST00000604049 488 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 VIS1.1-201ENST00000610517 203 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD13P35453 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD13P35453 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD13P35453 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXD13P35453 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
HOXD13P35453 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXD13P35453 AF127577.6-201ENST00000623352 2191 ntBASIC3.95□□□□□ -1.78
HOXD13P35453 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD13P35453 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD13P35453 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXD13P35453 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD13P35453 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXD13P35453 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HOXD13P35453 RNU6-1155P-201ENST00000363554 107 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 SNORD6-201ENST00000365444 73 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXD13P35453 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 MTCYBP34-201ENST00000439552 670 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 AL359073.1-201ENST00000448036 403 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 MTCO3P20-201ENST00000454926 688 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 AC007967.1-201ENST00000455422 1159 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 BX322784.1-201ENST00000455793 1077 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 CEACAMP4-201ENST00000457676 421 ntBASIC3.94□□□□□ -1.78
HOXD13P35453 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXD13P35453 MTND2P14-201ENST00000482139 351 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms