Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MIR4660-201ENST00000583549 74 ntBASIC5.97□□□□□ -1.45
RXRBP28702 MIR5195-201ENST00000583555 115 ntBASIC5.97□□□□□ -1.45
RXRBP28702 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.97□□□□□ -1.45
RXRBP28702 AC004853.1-201ENST00000604902 698 ntBASIC5.97□□□□□ -1.45
RXRBP28702 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.97□□□□□ -1.45
RXRBP28702 AC020634.1-201ENST00000608701 549 ntBASIC5.97□□□□□ -1.45
RXRBP28702 AL133215.3-201ENST00000609801 448 ntBASIC5.97□□□□□ -1.45
RXRBP28702 AL132822.1-201ENST00000617063 513 ntBASIC5.97□□□□□ -1.45
RXRBP28702 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.97□□□□□ -1.45
RXRBP28702 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RXRBP28702 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RXRBP28702 AC092376.2-201ENST00000622621 4116 ntBASIC5.97□□□□□ -1.45
RXRBP28702 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RXRBP28702 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RXRBP28702 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RXRBP28702 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RXRBP28702 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.96□□□□□ -1.45
RXRBP28702 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
RXRBP28702 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RXRBP28702 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RXRBP28702 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 SNRPEP3-201ENST00000338402 276 ntBASIC5.96□□□□□ -1.46
RXRBP28702 SNORA69-201ENST00000383895 132 ntBASIC5.96□□□□□ -1.46
RXRBP28702 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RXRBP28702 Y_RNA.579-201ENST00000390939 94 ntBASIC5.96□□□□□ -1.46
RXRBP28702 RN7SKP140-201ENST00000411196 284 ntBASIC5.96□□□□□ -1.46
RXRBP28702 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.96□□□□□ -1.46
RXRBP28702 CYCSP32-201ENST00000440548 321 ntBASIC5.96□□□□□ -1.46
RXRBP28702 AC092809.1-201ENST00000441469 474 ntBASIC5.96□□□□□ -1.46
RXRBP28702 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.96□□□□□ -1.46
RXRBP28702 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 NF1P3-201ENST00000457709 450 ntBASIC5.96□□□□□ -1.46
RXRBP28702 AC097493.1-201ENST00000463958 372 ntBASIC5.96□□□□□ -1.46
RXRBP28702 AC023194.1-201ENST00000493084 308 ntBASIC5.96□□□□□ -1.46
RXRBP28702 AC025164.1-201ENST00000496249 478 ntBASIC5.96□□□□□ -1.46
RXRBP28702 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.96□□□□□ -1.46
RXRBP28702 AC111193.1-201ENST00000504097 155 ntBASIC5.96□□□□□ -1.46
RXRBP28702 RNU6-150P-201ENST00000516237 95 ntBASIC5.96□□□□□ -1.46
RXRBP28702 RNU1-103P-201ENST00000516502 125 ntBASIC5.96□□□□□ -1.46
RXRBP28702 Y_RNA.691-201ENST00000516611 103 ntBASIC5.96□□□□□ -1.46
RXRBP28702 Y_RNA.711-201ENST00000516993 102 ntBASIC5.96□□□□□ -1.46
RXRBP28702 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.96□□□□□ -1.46
RXRBP28702 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.96□□□□□ -1.46
RXRBP28702 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.96□□□□□ -1.46
RXRBP28702 AC008083.2-201ENST00000546707 476 ntBASIC5.96□□□□□ -1.46
RXRBP28702 DNAJC8P1-201ENST00000554535 372 ntBASIC5.96□□□□□ -1.46
RXRBP28702 SCOCP1-201ENST00000554676 349 ntBASIC5.96□□□□□ -1.46
RXRBP28702 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.96□□□□□ -1.46
RXRBP28702 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 AL606490.9-201ENST00000603331 271 ntBASIC5.96□□□□□ -1.46
RXRBP28702 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.96□□□□□ -1.46
RXRBP28702 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RXRBP28702 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.96□□□□□ -1.46
RXRBP28702 PROS2P-201ENST00000474651 1951 ntBASIC5.96□□□□□ -1.46
RXRBP28702 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RXRBP28702 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.96□□□□□ -1.46
RXRBP28702 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.96□□□□□ -1.46
RXRBP28702 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RXRBP28702 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RXRBP28702 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RXRBP28702 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RXRBP28702 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RXRBP28702 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RXRBP28702 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RXRBP28702 AP005435.3-201ENST00000531260 3198 ntBASIC5.95□□□□□ -1.46
RXRBP28702 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RXRBP28702 Y_RNA.315-201ENST00000365117 102 ntBASIC5.95□□□□□ -1.46
RXRBP28702 RNU6-43P-201ENST00000384302 107 ntBASIC5.95□□□□□ -1.46
RXRBP28702 U3.32-201ENST00000408116 212 ntBASIC5.95□□□□□ -1.46
RXRBP28702 RNU6-373P-201ENST00000411247 98 ntBASIC5.95□□□□□ -1.46
RXRBP28702 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.95□□□□□ -1.46
RXRBP28702 MTCYBP8-201ENST00000422855 651 ntBASIC5.95□□□□□ -1.46
RXRBP28702 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.95□□□□□ -1.46
RXRBP28702 AC091286.1-201ENST00000431233 461 ntBASIC5.95□□□□□ -1.46
RXRBP28702 AL606489.2-201ENST00000433886 234 ntBASIC5.95□□□□□ -1.46
RXRBP28702 AC138761.5-201ENST00000433967 325 ntBASIC5.95□□□□□ -1.46
RXRBP28702 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC5.95□□□□□ -1.46
RXRBP28702 AC016691.1-201ENST00000441321 413 ntBASIC5.95□□□□□ -1.46
RXRBP28702 NOTCH2P1-201ENST00000443481 624 ntBASIC5.95□□□□□ -1.46
RXRBP28702 GAPDHP14-201ENST00000450472 937 ntBASIC5.95□□□□□ -1.46
RXRBP28702 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RXRBP28702 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.95□□□□□ -1.46
RXRBP28702 RN7SL691P-201ENST00000494487 301 ntBASIC5.95□□□□□ -1.46
RXRBP28702 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.95□□□□□ -1.46
RXRBP28702 MTND4LP22-201ENST00000508209 276 ntBASIC5.95□□□□□ -1.46
RXRBP28702 RNA5SP230-201ENST00000517039 122 ntBASIC5.95□□□□□ -1.46
RXRBP28702 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RXRBP28702 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.95□□□□□ -1.46
RXRBP28702 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.95□□□□□ -1.46
RXRBP28702 POLR2KP1-201ENST00000553226 168 ntBASIC5.95□□□□□ -1.46
RXRBP28702 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.95□□□□□ -1.46
RXRBP28702 AC007823.1-201ENST00000569932 1566 ntBASIC5.95□□□□□ -1.46
RXRBP28702 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.95□□□□□ -1.46
RXRBP28702 MIR98-201ENST00000606724 119 ntBASIC5.95□□□□□ -1.46
RXRBP28702 DISC2.1-201ENST00000612827 205 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms