Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX1P22670 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX1P22670 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX1P22670 AP000763.2-201ENST00000540641 163 ntBASIC6.05□□□□□ -1.44
RFX1P22670 HMGN2P6-201ENST00000551091 273 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.05□□□□□ -1.44
RFX1P22670 AC012669.1-201ENST00000603209 283 ntBASIC6.05□□□□□ -1.44
RFX1P22670 CYP2C61P-201ENST00000604072 290 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC6.05□□□□□ -1.44
RFX1P22670 AL512329.2-201ENST00000607350 548 ntBASIC6.05□□□□□ -1.44
RFX1P22670 MIR8080-201ENST00000622224 89 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AC015871.5-202ENST00000623252 701 ntBASIC6.05□□□□□ -1.44
RFX1P22670 AC138965.3-201ENST00000623875 498 ntBASIC6.05□□□□□ -1.44
RFX1P22670 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RFX1P22670 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFX1P22670 AC087516.1-201ENST00000561236 2428 ntBASIC6.05□□□□□ -1.44
RFX1P22670 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFX1P22670 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RFX1P22670 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RFX1P22670 AC140134.1-201ENST00000511830 3544 ntBASIC6.04□□□□□ -1.44
RFX1P22670 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
RFX1P22670 PABPC1P6-201ENST00000445594 1829 ntBASIC6.04□□□□□ -1.44
RFX1P22670 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX1P22670 RNU6-1249P-201ENST00000363237 111 ntBASIC6.04□□□□□ -1.44
RFX1P22670 Y_RNA.216-201ENST00000364205 93 ntBASIC6.04□□□□□ -1.44
RFX1P22670 RNU6-1127P-201ENST00000384580 107 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AL645927.1-201ENST00000396783 406 ntBASIC6.04□□□□□ -1.44
RFX1P22670 MTCYBP4-201ENST00000401524 249 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AL080315.1-201ENST00000406055 466 ntBASIC6.04□□□□□ -1.44
RFX1P22670 RNU4-78P-201ENST00000410940 126 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AC099677.1-201ENST00000420575 175 ntBASIC6.04□□□□□ -1.44
RFX1P22670 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.04□□□□□ -1.44
RFX1P22670 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.04□□□□□ -1.44
RFX1P22670 CEACAMP6-201ENST00000452007 574 ntBASIC6.04□□□□□ -1.44
RFX1P22670 ALG13-211ENST00000473389 693 ntTSL 2 BASIC6.04□□□□□ -1.44
RFX1P22670 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC6.04□□□□□ -1.44
RFX1P22670 RPL21P93-201ENST00000480465 489 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AC007686.1-201ENST00000488511 463 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.04□□□□□ -1.44
RFX1P22670 RNU6-189P-201ENST00000516120 101 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.04□□□□□ -1.44
RFX1P22670 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC6.04□□□□□ -1.44
RFX1P22670 AL163153.1-201ENST00000554223 283 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.04□□□□□ -1.44
RFX1P22670 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.04□□□□□ -1.44
RFX1P22670 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.04□□□□□ -1.44
RFX1P22670 MIR7853-201ENST00000584820 132 ntBASIC6.04□□□□□ -1.44
RFX1P22670 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFX1P22670 AF038458.1-201ENST00000588406 262 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
RFX1P22670 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC6.04□□□□□ -1.44
RFX1P22670 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AC092747.3-201ENST00000603769 301 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AL138889.2-201ENST00000603883 242 ntBASIC6.04□□□□□ -1.44
RFX1P22670 IGHV3-29-201ENST00000604817 344 ntBASIC6.04□□□□□ -1.44
RFX1P22670 AC040896.1-201ENST00000613819 479 ntBASIC6.04□□□□□ -1.44
RFX1P22670 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX1P22670 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.04□□□□□ -1.44
RFX1P22670 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX1P22670 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX1P22670 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX1P22670 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RFX1P22670 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RFX1P22670 BTBD10P1-201ENST00000549824 1352 ntBASIC6.04□□□□□ -1.44
RFX1P22670 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.04□□□□□ -1.44
RFX1P22670 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.04□□□□□ -1.44
RFX1P22670 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RFX1P22670 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.03□□□□□ -1.44
RFX1P22670 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX1P22670 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.03□□□□□ -1.44
RFX1P22670 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX1P22670 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.03□□□□□ -1.44
RFX1P22670 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX1P22670 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RFX1P22670 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
RFX1P22670 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.03□□□□□ -1.44
RFX1P22670 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
RFX1P22670 THAP12P5-201ENST00000405864 2275 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RNU6-1252P-201ENST00000363054 104 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RNU6-254P-201ENST00000363377 107 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RN7SKP103-201ENST00000363848 320 ntBASIC6.03□□□□□ -1.44
RFX1P22670 Y_RNA.399-201ENST00000383955 105 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RNU6-356P-201ENST00000384140 107 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RNU6-1160P-201ENST00000384546 104 ntBASIC6.03□□□□□ -1.44
RFX1P22670 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RFX1P22670 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RFX1P22670 AC110754.1-201ENST00000399740 601 ntBASIC6.03□□□□□ -1.44
RFX1P22670 AC009804.1-201ENST00000400949 179 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RNU6-712P-201ENST00000410558 100 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RN7SKP213-201ENST00000410746 298 ntBASIC6.03□□□□□ -1.44
RFX1P22670 AC090774.1-201ENST00000435925 246 ntBASIC6.03□□□□□ -1.44
RFX1P22670 PRPF38AP2-201ENST00000438179 851 ntBASIC6.03□□□□□ -1.44
RFX1P22670 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.03□□□□□ -1.44
RFX1P22670 RPL7L1P1-201ENST00000448259 785 ntBASIC6.03□□□□□ -1.44
RFX1P22670 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.03□□□□□ -1.44
RFX1P22670 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.03□□□□□ -1.44
RFX1P22670 RN7SL172P-201ENST00000460535 303 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RPS23P6-201ENST00000466136 431 ntBASIC6.03□□□□□ -1.44
RFX1P22670 TRBV1-201ENST00000476502 284 ntBASIC6.03□□□□□ -1.44
RFX1P22670 RPL39P5-202ENST00000512505 151 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms