Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL671855.1-201ENST00000446875 1203 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 RNU6-261P-201ENST00000459506 102 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.77□□□□□ -1.49
ERCC3P19447 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.77□□□□□ -1.49
ERCC3P19447 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.77□□□□□ -1.49
ERCC3P19447 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.77□□□□□ -1.49
ERCC3P19447 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC3P19447 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC3P19447 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC3P19447 ARL2BPP2-201ENST00000550907 489 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.77□□□□□ -1.49
ERCC3P19447 MIR4697-201ENST00000582977 78 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 AF038458.1-201ENST00000588406 262 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AC060780.3-201ENST00000589464 80 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.77□□□□□ -1.49
ERCC3P19447 XIAPP1-201ENST00000603162 600 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 LINC00901.1-201ENST00000617252 152 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
ERCC3P19447 FRG1KP-201ENST00000623592 341 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 AC006065.6-201ENST00000625201 545 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
ERCC3P19447 AC026951.1-201ENST00000559530 2459 ntBASIC5.77□□□□□ -1.49
ERCC3P19447 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC3P19447 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ERCC3P19447 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.77□□□□□ -1.49
ERCC3P19447 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ERCC3P19447 AC099654.2-201ENST00000433031 1980 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 AC108751.5-201ENST00000492880 1336 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
ERCC3P19447 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC3P19447 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC3P19447 FAM91A3P-201ENST00000456826 2544 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC3P19447 Y_RNA.367-201ENST00000365544 101 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 RNU6-1279P-201ENST00000383917 103 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 SNORA2.3-201ENST00000383920 135 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 RNU6-74P-201ENST00000384235 107 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 MIR558-201ENST00000384920 94 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ERCC3P19447 RNU6-754P-201ENST00000391166 107 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC3P19447 AL359643.1-201ENST00000404109 423 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 AL583834.1-201ENST00000406943 343 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 SNORA77-201ENST00000408716 125 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 RNU2-39P-201ENST00000410604 198 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 AC099677.1-201ENST00000420575 175 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
ERCC3P19447 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.76□□□□□ -1.49
ERCC3P19447 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC3P19447 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC3P19447 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.76□□□□□ -1.49
ERCC3P19447 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5.76□□□□□ -1.49
ERCC3P19447 RN7SL354P-201ENST00000469282 294 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC3P19447 RPL7P23-201ENST00000493874 747 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 HMGB1P19-201ENST00000517578 577 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC3P19447 AP003072.2-201ENST00000527756 676 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC3P19447 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC3P19447 AL121603.1-201ENST00000553815 142 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.76□□□□□ -1.49
ERCC3P19447 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
ERCC3P19447 AC010680.3-201ENST00000604215 520 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 AC024940.5-201ENST00000622889 474 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 AC243312.2-201ENST00000623340 601 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC3P19447 MTND4P12-201ENST00000498999 1377 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ERCC3P19447 AC108467.2-201ENST00000617640 1597 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.76□□□□□ -1.49
ERCC3P19447 AC008079.2-201ENST00000623543 20396 ntBASIC5.76□□□□□ -1.49
ERCC3P19447 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.75□□□□□ -1.49
ERCC3P19447 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ERCC3P19447 AC104623.2-202ENST00000623477 4002 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
ERCC3P19447 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
ERCC3P19447 HSPE1P11-201ENST00000339579 310 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 RNU6-908P-201ENST00000410160 94 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 OR9R1P-201ENST00000412200 877 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 RPS7P15-201ENST00000415804 584 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC3P19447 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.75□□□□□ -1.49
ERCC3P19447 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.75□□□□□ -1.49
ERCC3P19447 AC004866.2-201ENST00000438285 481 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC3P19447 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.75□□□□□ -1.49
ERCC3P19447 AC006967.1-201ENST00000467608 589 ntBASIC5.75□□□□□ -1.49
ERCC3P19447 AC233702.1-201ENST00000482905 502 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms