Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC112187.2-201ENST00000604345 283 ntBASIC3.98□□□□□ -1.77
CTPS1P17812 AL592436.1-201ENST00000605135 558 ntBASIC3.98□□□□□ -1.77
CTPS1P17812 AC068276.1-201ENST00000605793 379 ntBASIC3.98□□□□□ -1.77
CTPS1P17812 AC097468.3-201ENST00000607956 456 ntBASIC3.98□□□□□ -1.77
CTPS1P17812 AC239868.4-201ENST00000608318 671 ntBASIC3.98□□□□□ -1.77
CTPS1P17812 AL357080.1-201ENST00000617394 239 ntBASIC3.98□□□□□ -1.77
CTPS1P17812 AL445264.1-201ENST00000621719 171 ntBASIC3.98□□□□□ -1.77
CTPS1P17812 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.98□□□□□ -1.77
CTPS1P17812 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.98□□□□□ -1.77
CTPS1P17812 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTPS1P17812 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTPS1P17812 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTPS1P17812 AP002001.2-201ENST00000529025 1469 ntBASIC3.98□□□□□ -1.77
CTPS1P17812 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CTPS1P17812 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTPS1P17812 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTPS1P17812 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTPS1P17812 AC007390.2-201ENST00000606229 3803 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTPS1P17812 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.97□□□□□ -1.77
CTPS1P17812 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.97□□□□□ -1.77
CTPS1P17812 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTPS1P17812 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CTPS1P17812 RNVU1-3-201ENST00000364313 161 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RNU6-730P-201ENST00000383954 104 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RNU6-878P-201ENST00000384578 110 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RNY3P10-201ENST00000384764 102 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 SNORA3C-201ENST00000408792 125 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RN7SKP266-201ENST00000410232 287 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RNA5SP306-201ENST00000411087 107 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.97□□□□□ -1.77
CTPS1P17812 RPL17P12-201ENST00000413391 526 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RPL7AP73-201ENST00000413490 353 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC012065.2-201ENST00000421295 375 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC092832.1-201ENST00000422934 400 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.97□□□□□ -1.77
CTPS1P17812 RPL7P28-201ENST00000437739 740 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC127537.2-201ENST00000439258 465 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RPS29P7-201ENST00000439662 171 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC002381.1-201ENST00000447049 280 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.97□□□□□ -1.77
CTPS1P17812 VN1R105P-201ENST00000486595 910 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RPL31P61-201ENST00000496160 376 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC010460.1-201ENST00000507087 466 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.97□□□□□ -1.77
CTPS1P17812 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.97□□□□□ -1.77
CTPS1P17812 OR5AP1P-201ENST00000529730 940 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 RFPL1S-203ENST00000539579 330 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.97□□□□□ -1.77
CTPS1P17812 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.97□□□□□ -1.77
CTPS1P17812 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.97□□□□□ -1.77
CTPS1P17812 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC091489.2-201ENST00000566263 604 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC083760.1-201ENST00000589621 670 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.97□□□□□ -1.77
CTPS1P17812 AP000403.1-201ENST00000603349 851 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AC024941.1-201ENST00000612250 334 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.97□□□□□ -1.77
CTPS1P17812 AC098679.4-201ENST00000624241 654 ntBASIC3.97□□□□□ -1.77
CTPS1P17812 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
CTPS1P17812 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.97□□□□□ -1.77
CTPS1P17812 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CTPS1P17812 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CTPS1P17812 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CTPS1P17812 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
CTPS1P17812 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CTPS1P17812 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CTPS1P17812 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CTPS1P17812 Y_RNA.97-201ENST00000363094 102 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 RNU6-343P-201ENST00000364709 104 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 RNU4-91P-201ENST00000364778 135 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 RNU6-339P-201ENST00000384310 107 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 Y_RNA.493-201ENST00000384422 102 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 Y_RNA.559-201ENST00000384686 107 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 MT-TC-201ENST00000387405 66 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 U8.14-201ENST00000390843 143 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.96□□□□□ -1.78
CTPS1P17812 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.96□□□□□ -1.78
CTPS1P17812 MTATP6P27-201ENST00000416987 621 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 MTCO2P34-201ENST00000421994 607 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 AC006366.1-201ENST00000422002 759 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 MTCO2P5-201ENST00000422621 426 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 MUPP-201ENST00000438111 566 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.96□□□□□ -1.78
CTPS1P17812 MTCO1P19-201ENST00000443487 500 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 HMGN2P21-201ENST00000447764 270 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.96□□□□□ -1.78
CTPS1P17812 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.96□□□□□ -1.78
CTPS1P17812 RN7SL271P-201ENST00000487601 295 ntBASIC3.96□□□□□ -1.78
CTPS1P17812 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.96□□□□□ -1.78
CTPS1P17812 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.96□□□□□ -1.78
CTPS1P17812 AC116347.2-201ENST00000514912 523 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms