Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB2P05538 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQB2P05538 RPL21P66-201ENST00000426566 466 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 SAR1AP4-201ENST00000429225 591 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB2P05538 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB2P05538 RPL21P2-201ENST00000440049 481 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQB2P05538 NECAP1P2-201ENST00000455668 727 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 SYPL1P1-201ENST00000473622 768 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 MTCO3P35-201ENST00000485582 781 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQB2P05538 AC090543.1-201ENST00000492168 485 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQB2P05538 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DQB2P05538 HMGB1P46-201ENST00000520062 610 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB2P05538 AP004371.1-201ENST00000525240 214 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB2P05538 AL391156.1-201ENST00000554965 554 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DQB2P05538 AL157394.1-201ENST00000562983 1224 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 CBX3P2-202ENST00000583365 535 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DQB2P05538 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DQB2P05538 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQB2P05538 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQB2P05538 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQB2P05538 MTND5P28-201ENST00000438005 1594 ntBASIC2.56□□□□□ -2
HLA-DQB2P05538 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQB2P05538 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DQB2P05538 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB2P05538 VTA1P1-201ENST00000414044 866 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQB2P05538 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQB2P05538 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQB2P05538 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQB2P05538 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 ELOCP13-201ENST00000443934 329 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 AC097499.1-201ENST00000444277 208 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 RPS24P6-201ENST00000452670 400 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 RPS3P1-201ENST00000456781 192 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 snoU13.3-201ENST00000459441 104 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DQB2P05538 AC108157.1-201ENST00000510511 539 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 RPL7L1P13-201ENST00000511702 739 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 AC026412.2-201ENST00000512270 1075 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB2P05538 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB2P05538 AC109635.4-202ENST00000531666 412 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 AL590282.1-201ENST00000610379 1136 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB2P05538 U73479.1-201ENST00000618062 168 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DQB2P05538 AP003485.2-201ENST00000623636 610 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 U6.107-201ENST00000637108 79 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 CRYM-AS1-204ENST00000637983 556 ntBASIC2.55□□□□□ -2
HLA-DQB2P05538 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DQB2P05538 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQB2P05538 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQB2P05538 MIR518C-201ENST00000384822 101 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 MIR27B-201ENST00000385129 97 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 SNORA26.7-201ENST00000391288 122 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AL162578.1-201ENST00000406202 378 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB2P05538 MTCO1P57-201ENST00000432182 261 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 YWHAZP8-201ENST00000436935 731 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB2P05538 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB2P05538 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB2P05538 NPM1P13-201ENST00000452663 865 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AL590639.1-201ENST00000456484 337 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DQB2P05538 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DQB2P05538 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQB2P05538 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB2P05538 RN7SKP24-201ENST00000515888 284 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 RNU1-103P-201ENST00000516502 125 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.54□□□□□ -2
HLA-DQB2P05538 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQB2P05538 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DQB2P05538 SERPINE4P-201ENST00000554978 281 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.54□□□□□ -2
HLA-DQB2P05538 MTCYBP28-201ENST00000566728 1132 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AL390838.2-201ENST00000602394 274 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AL627309.6-201ENST00000606857 840 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AL390240.1-201ENST00000612950 384 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AC231759.1-201ENST00000616455 597 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 AC007998.5-201ENST00000622938 237 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 MAPK10-322ENST00000641485 4530 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DQB2P05538 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.54□□□□□ -2
HLA-DQB2P05538 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.53□□□□□ -2
HLA-DQB2P05538 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
HLA-DQB2P05538 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.53□□□□□ -2
HLA-DQB2P05538 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HLA-DQB2P05538 MIR142-201ENST00000384835 87 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 MIR1250-201ENST00000408098 113 ntBASIC2.53□□□□□ -2
HLA-DQB2P05538 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 187.7 ms