Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LRRC6P1-201ENST00000532188 885 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AL163153.1-201ENST00000554223 283 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC012182.1-201ENST00000570133 895 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 MTND3P13-201ENST00000574391 343 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 MIR5187-201ENST00000583479 76 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 RNU1-30P-201ENST00000606575 163 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC016877.3-201ENST00000606778 504 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 U6.101-201ENST00000637707 76 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.45□□□□□ -2.02
HLA-DQA1P01909 API5P2-201ENST00000397055 1498 ntBASIC2.45□□□□□ -2.02
HLA-DQA1P01909 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 RNA5SP515-201ENST00000364570 118 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 SNRPEP2-201ENST00000397592 279 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 RNA5SP129-201ENST00000410276 118 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 RN7SKP202-201ENST00000410439 330 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 PSMA6P3-201ENST00000428242 164 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL133162.1-201ENST00000463228 453 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AP004217.1-201ENST00000480579 346 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 KLRA1P-201ENST00000503499 986 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 PRELID3BP6-201ENST00000503839 571 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC096571.1-202ENST00000506634 735 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 RN7SKP31-201ENST00000516354 278 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC010376.1-201ENST00000522101 334 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 EEF1B2P4-201ENST00000551398 348 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC069431.2-201ENST00000604149 1099 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL451086.1-201ENST00000605596 223 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL121652.1-201ENST00000608851 448 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL159169.3-201ENST00000608871 561 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 uc_338.1-201ENST00000612113 180 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AL356863.1-201ENST00000623378 1080 ntBASIC2.44□□□□□ -2.02
HLA-DQA1P01909 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.44□□□□□ -2.02
HLA-DQA1P01909 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 CR383658.2-201ENST00000547576 1525 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 RPL23AP57-201ENST00000332361 466 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 SNRPEP3-201ENST00000338402 276 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 Y_RNA.25-201ENST00000362528 102 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 RNU1-70P-201ENST00000362618 164 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 RNU4-51P-201ENST00000364206 140 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 Y_RNA.472-201ENST00000384322 102 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 SNORD3H-201ENST00000384486 214 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 MIR122-201ENST00000385044 85 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 SNORA40.2-201ENST00000390847 128 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 MTCO3P12-201ENST00000416718 547 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AC007435.1-201ENST00000421086 415 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 RPF2P1-201ENST00000424137 906 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AL445584.1-201ENST00000431451 330 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 HMGB1P12-201ENST00000438594 598 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.43□□□□□ -2.02
HLA-DQA1P01909 NECAP1P2-201ENST00000455668 727 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 snoU13.4-201ENST00000458916 104 ntBASIC2.43□□□□□ -2.02
HLA-DQA1P01909 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms