Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC090616.5-202ENST00000582111 297 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC079610.2-201ENST00000604818 690 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC026741.1-201ENST00000605892 482 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 OR2BH1P-201ENST00000608850 864 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC135507.2-201ENST00000612443 309 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 VN1R9P-201ENST00000614184 867 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 RMST_10.1-201ENST00000616309 154 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 AP002371.2-201ENST00000624450 503 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 U6.107-201ENST00000637108 79 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.03□□□□□ -1.92
CTDNEP1O95476 AC011978.2-201ENST00000569835 2054 ntBASIC3.03□□□□□ -1.92
CTDNEP1O95476 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CTDNEP1O95476 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.03□□□□□ -1.93
CTDNEP1O95476 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 SNORD56.4-201ENST00000363883 71 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CTDNEP1O95476 RPL22P22-201ENST00000395439 379 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 SNORA11.1-201ENST00000408133 129 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 VTA1P1-201ENST00000414044 866 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 HIGD1AP11-201ENST00000438361 280 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC104308.1-201ENST00000454621 333 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC008562.1-201ENST00000521763 330 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC243972.3-201ENST00000539655 198 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 GTF3AP2-201ENST00000557014 266 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 AC005014.3-201ENST00000605985 190 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 AL451074.6-201ENST00000608512 729 ntBASIC3.02□□□□□ -1.93
CTDNEP1O95476 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.02□□□□□ -1.93
CTDNEP1O95476 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CTDNEP1O95476 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CTDNEP1O95476 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC116096.1-201ENST00000566804 2314 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 SNORA63.3-201ENST00000362682 132 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 MIR592-201ENST00000384959 97 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 RPLP0P7-201ENST00000416050 667 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 DPPA2P1-201ENST00000428060 556 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 FO393414.1-201ENST00000428697 1184 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 OR51AB1P-201ENST00000429046 620 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 SAR1AP4-201ENST00000429225 591 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 RPL7P29-201ENST00000437151 728 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AL158053.1-201ENST00000441503 453 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 MOB1AP2-201ENST00000446060 614 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CTDNEP1O95476 RPL7P55-201ENST00000450522 746 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 NF1P3-201ENST00000457709 450 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 RPS3AP14-201ENST00000483907 780 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC112198.4-201ENST00000515450 351 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 SNORA31.21-201ENST00000517180 77 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 CKS1BP7-201ENST00000522230 235 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 COX6CP8-201ENST00000522620 226 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC090751.1-201ENST00000566966 267 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC005951.1-201ENST00000576706 485 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 RN7SL622P-201ENST00000585292 275 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 BNIP3P22-201ENST00000593399 556 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC068880.4-201ENST00000623082 495 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC006386.2-201ENST00000624491 75 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 AC012005.1-201ENST00000624575 75 ntBASIC3.01□□□□□ -1.93
CTDNEP1O95476 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.01□□□□□ -1.93
CTDNEP1O95476 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3□□□□□ -1.93
CTDNEP1O95476 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3□□□□□ -1.93
CTDNEP1O95476 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3□□□□□ -1.93
CTDNEP1O95476 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CTDNEP1O95476 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CTDNEP1O95476 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms