Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
LDB3O75112 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LDB3O75112 SNORA51.6-201ENST00000384151 125 ntBASIC3.78□□□□□ -1.8
LDB3O75112 RNU6-297P-201ENST00000384636 107 ntBASIC3.78□□□□□ -1.8
LDB3O75112 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 RPL31P2-201ENST00000413849 377 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB3O75112 OR51AB1P-201ENST00000429046 620 ntBASIC3.78□□□□□ -1.8
LDB3O75112 PSMA2P3-201ENST00000429685 675 ntBASIC3.78□□□□□ -1.8
LDB3O75112 ZYG11AP1-201ENST00000430329 837 ntBASIC3.78□□□□□ -1.8
LDB3O75112 MTND1P2-201ENST00000430604 821 ntBASIC3.78□□□□□ -1.8
LDB3O75112 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB3O75112 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB3O75112 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB3O75112 UBE2V1P8-201ENST00000437166 265 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AL121601.2-201ENST00000438019 707 ntBASIC3.78□□□□□ -1.8
LDB3O75112 RPL29P29-201ENST00000448725 423 ntBASIC3.78□□□□□ -1.8
LDB3O75112 NDUFS5P3-201ENST00000450668 321 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AC003071.1-201ENST00000451219 789 ntBASIC3.78□□□□□ -1.8
LDB3O75112 SSXP1-201ENST00000453640 473 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB3O75112 AC103987.1-201ENST00000473394 348 ntBASIC3.78□□□□□ -1.8
LDB3O75112 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB3O75112 RNF138P1-201ENST00000502765 546 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB3O75112 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB3O75112 MTND4LP18-201ENST00000526864 291 ntBASIC3.78□□□□□ -1.8
LDB3O75112 OR8L1P-201ENST00000534005 955 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AC008127.2-201ENST00000549925 1075 ntBASIC3.78□□□□□ -1.8
LDB3O75112 RPS3AP4-201ENST00000555161 764 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AC007224.1-201ENST00000564410 144 ntBASIC3.78□□□□□ -1.8
LDB3O75112 MIR548S-201ENST00000581352 82 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB3O75112 BNIP3P11-201ENST00000603878 563 ntBASIC3.78□□□□□ -1.8
LDB3O75112 LARP7P1-201ENST00000605576 316 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AC090517.2-201ENST00000614966 680 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AL359314.1-201ENST00000616913 261 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.78□□□□□ -1.8
LDB3O75112 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.78□□□□□ -1.8
LDB3O75112 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.78□□□□□ -1.8
LDB3O75112 AL157786.1-207ENST00000627771 695 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AL773545.4-201ENST00000637262 310 ntBASIC3.78□□□□□ -1.8
LDB3O75112 AL513478.4-201ENST00000641636 310 ntBASIC3.78□□□□□ -1.8
LDB3O75112 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 AC007390.2-201ENST00000606229 3803 ntBASIC3.78□□□□□ -1.8
LDB3O75112 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.78□□□□□ -1.8
LDB3O75112 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LDB3O75112 OR4G11P-202ENST00000642116 1414 ntBASIC3.78□□□□□ -1.8
LDB3O75112 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.81
LDB3O75112 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB3O75112 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LDB3O75112 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB3O75112 MTND5P26-201ENST00000426018 1752 ntBASIC3.77□□□□□ -1.81
LDB3O75112 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB3O75112 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 RNU4-91P-201ENST00000364778 135 ntBASIC3.77□□□□□ -1.81
LDB3O75112 RN7SKP226-201ENST00000364912 300 ntBASIC3.77□□□□□ -1.81
LDB3O75112 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB3O75112 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
LDB3O75112 RNU6-259P-201ENST00000383999 107 ntBASIC3.77□□□□□ -1.81
LDB3O75112 RNU6-356P-201ENST00000384140 107 ntBASIC3.77□□□□□ -1.81
LDB3O75112 RNU6-1226P-201ENST00000384317 107 ntBASIC3.77□□□□□ -1.81
LDB3O75112 MIR124-3-201ENST00000384866 87 ntBASIC3.77□□□□□ -1.81
LDB3O75112 MTND4LP20-201ENST00000402379 270 ntBASIC3.77□□□□□ -1.81
LDB3O75112 SSXP10-201ENST00000402595 565 ntBASIC3.77□□□□□ -1.81
LDB3O75112 AC083875.1-201ENST00000419509 405 ntBASIC3.77□□□□□ -1.81
LDB3O75112 MTCO2P19-201ENST00000427513 598 ntBASIC3.77□□□□□ -1.81
LDB3O75112 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB3O75112 AC091862.1-201ENST00000438016 1100 ntBASIC3.77□□□□□ -1.81
LDB3O75112 AL162151.2-201ENST00000448875 158 ntBASIC3.77□□□□□ -1.81
LDB3O75112 PPIAP3-201ENST00000450588 505 ntBASIC3.77□□□□□ -1.81
LDB3O75112 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB3O75112 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB3O75112 AC146507.1-201ENST00000468335 354 ntBASIC3.77□□□□□ -1.81
LDB3O75112 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 AL132838.2-201ENST00000492041 314 ntBASIC3.77□□□□□ -1.81
LDB3O75112 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB3O75112 RN7SKP244-201ENST00000516513 307 ntBASIC3.77□□□□□ -1.81
LDB3O75112 AP002748.2-201ENST00000528671 348 ntBASIC3.77□□□□□ -1.81
LDB3O75112 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.77□□□□□ -1.81
LDB3O75112 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.77□□□□□ -1.81
LDB3O75112 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB3O75112 HSPE1P3-201ENST00000559254 309 ntBASIC3.77□□□□□ -1.81
LDB3O75112 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB3O75112 AC136618.2-201ENST00000575091 400 ntBASIC3.77□□□□□ -1.81
LDB3O75112 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.77□□□□□ -1.81
LDB3O75112 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.77□□□□□ -1.81
LDB3O75112 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LDB3O75112 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.77□□□□□ -1.81
LDB3O75112 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.77□□□□□ -1.81
LDB3O75112 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms