Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC025588.4-201ENST00000615802 908 ntBASIC3.94□□□□□ -1.78
LDB2O43679 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LDB2O43679 AL591424.2-201ENST00000617023 128 ntBASIC3.94□□□□□ -1.78
LDB2O43679 MIR6875-201ENST00000617506 72 ntBASIC3.94□□□□□ -1.78
LDB2O43679 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.94□□□□□ -1.78
LDB2O43679 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.94□□□□□ -1.78
LDB2O43679 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LDB2O43679 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
LDB2O43679 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.94□□□□□ -1.78
LDB2O43679 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LDB2O43679 GDI2P1-201ENST00000429312 1336 ntBASIC3.94□□□□□ -1.78
LDB2O43679 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LDB2O43679 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
LDB2O43679 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LDB2O43679 TEX21P-201ENST00000447107 1476 ntBASIC3.93□□□□□ -1.78
LDB2O43679 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
LDB2O43679 AC018555.1-201ENST00000567548 1980 ntBASIC3.93□□□□□ -1.78
LDB2O43679 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.93□□□□□ -1.78
LDB2O43679 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.93□□□□□ -1.78
LDB2O43679 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LDB2O43679 RN7SKP280-201ENST00000364196 304 ntBASIC3.93□□□□□ -1.78
LDB2O43679 RNU6-777P-201ENST00000364265 104 ntBASIC3.93□□□□□ -1.78
LDB2O43679 RNU6-1226P-201ENST00000384317 107 ntBASIC3.93□□□□□ -1.78
LDB2O43679 RNU6-1215P-201ENST00000384441 102 ntBASIC3.93□□□□□ -1.78
LDB2O43679 U8.14-201ENST00000390843 143 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC016769.3-201ENST00000396562 315 ntBASIC3.93□□□□□ -1.78
LDB2O43679 DHFRP6-201ENST00000401776 268 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.93□□□□□ -1.78
LDB2O43679 ELOCP17-201ENST00000414751 326 ntBASIC3.93□□□□□ -1.78
LDB2O43679 FNDC3CP-201ENST00000420795 1155 ntBASIC3.93□□□□□ -1.78
LDB2O43679 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.93□□□□□ -1.78
LDB2O43679 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.93□□□□□ -1.78
LDB2O43679 ATP5HP2-201ENST00000433885 485 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.93□□□□□ -1.78
LDB2O43679 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.93□□□□□ -1.78
LDB2O43679 RANP8-201ENST00000444720 713 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AL451050.1-201ENST00000450126 415 ntBASIC3.93□□□□□ -1.78
LDB2O43679 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.93□□□□□ -1.78
LDB2O43679 SRRM1P2-201ENST00000464531 1192 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC017015.1-201ENST00000477387 286 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC108941.1-201ENST00000502853 530 ntBASIC3.93□□□□□ -1.78
LDB2O43679 PRELID3BP7-201ENST00000503606 469 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LDB2O43679 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LDB2O43679 AC110792.2-201ENST00000510278 224 ntBASIC3.93□□□□□ -1.78
LDB2O43679 DUXAP2-201ENST00000519198 589 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.93□□□□□ -1.78
LDB2O43679 AC013828.2-201ENST00000532487 235 ntBASIC3.93□□□□□ -1.78
LDB2O43679 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.93□□□□□ -1.78
LDB2O43679 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.93□□□□□ -1.78
LDB2O43679 OR6C73P-201ENST00000546432 358 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.93□□□□□ -1.78
LDB2O43679 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.93□□□□□ -1.78
LDB2O43679 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.93□□□□□ -1.78
LDB2O43679 AP003465.2-201ENST00000602571 373 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC091805.2-201ENST00000603848 235 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.93□□□□□ -1.78
LDB2O43679 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AL357080.1-201ENST00000617394 239 ntBASIC3.93□□□□□ -1.78
LDB2O43679 MIR4727-201ENST00000622232 55 ntBASIC3.93□□□□□ -1.78
LDB2O43679 AC093591.3-201ENST00000634516 308 ntBASIC3.93□□□□□ -1.78
LDB2O43679 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.93□□□□□ -1.78
LDB2O43679 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDB2O43679 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LDB2O43679 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.93□□□□□ -1.78
LDB2O43679 AC130650.2-201ENST00000618736 2403 ntBASIC3.93□□□□□ -1.78
LDB2O43679 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDB2O43679 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LDB2O43679 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
LDB2O43679 BDP1P-201ENST00000582658 1990 ntBASIC3.93□□□□□ -1.78
LDB2O43679 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LDB2O43679 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.92□□□□□ -1.78
LDB2O43679 AC012020.1-201ENST00000624541 1728 ntBASIC3.92□□□□□ -1.78
LDB2O43679 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LDB2O43679 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.92□□□□□ -1.78
LDB2O43679 AP002001.2-201ENST00000529025 1469 ntBASIC3.92□□□□□ -1.78
LDB2O43679 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LDB2O43679 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.92□□□□□ -1.78
LDB2O43679 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LDB2O43679 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LDB2O43679 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LDB2O43679 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.92□□□□□ -1.78
LDB2O43679 RNU5E-5P-201ENST00000365379 116 ntBASIC3.92□□□□□ -1.78
LDB2O43679 RNU6-1042P-201ENST00000384204 107 ntBASIC3.92□□□□□ -1.78
LDB2O43679 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.92□□□□□ -1.78
LDB2O43679 SSXP10-201ENST00000402595 565 ntBASIC3.92□□□□□ -1.78
LDB2O43679 MIR1305-201ENST00000408300 86 ntBASIC3.92□□□□□ -1.78
LDB2O43679 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.92□□□□□ -1.78
LDB2O43679 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.92□□□□□ -1.78
LDB2O43679 TPMTP2-201ENST00000414372 726 ntBASIC3.92□□□□□ -1.78
LDB2O43679 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.92□□□□□ -1.78
LDB2O43679 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.92□□□□□ -1.78
LDB2O43679 OFD1P18Y-201ENST00000420889 959 ntBASIC3.92□□□□□ -1.78
LDB2O43679 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.92□□□□□ -1.78
LDB2O43679 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.92□□□□□ -1.78
LDB2O43679 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.92□□□□□ -1.78
LDB2O43679 LSM1P1-201ENST00000438629 273 ntBASIC3.92□□□□□ -1.78
LDB2O43679 MTND5P14-201ENST00000441481 1267 ntBASIC3.92□□□□□ -1.78
LDB2O43679 RPL21P89-201ENST00000444021 467 ntBASIC3.92□□□□□ -1.78
LDB2O43679 PAXBP1P1-201ENST00000449315 447 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms