Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.37□□□□□ -1.71
PROM1O43490 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.37□□□□□ -1.71
PROM1O43490 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.37□□□□□ -1.71
PROM1O43490 AL020997.2-201ENST00000602607 184 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AL049634.3-201ENST00000604968 457 ntBASIC4.37□□□□□ -1.71
PROM1O43490 MIR98-201ENST00000606724 119 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AC011816.2-201ENST00000607089 556 ntBASIC4.37□□□□□ -1.71
PROM1O43490 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 SNX18P1Y-201ENST00000616231 511 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AC104260.1-201ENST00000616660 539 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.37□□□□□ -1.71
PROM1O43490 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.37□□□□□ -1.71
PROM1O43490 AC091905.1-201ENST00000624400 311 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AP005264.7-201ENST00000625003 745 ntBASIC4.37□□□□□ -1.71
PROM1O43490 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.37□□□□□ -1.71
PROM1O43490 AC010149.2-201ENST00000637608 315 ntBASIC4.37□□□□□ -1.71
PROM1O43490 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.37□□□□□ -1.71
PROM1O43490 AC011978.2-201ENST00000569835 2054 ntBASIC4.37□□□□□ -1.71
PROM1O43490 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
PROM1O43490 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PROM1O43490 ZNF137P-201ENST00000456718 1920 ntBASIC4.36□□□□□ -1.71
PROM1O43490 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
PROM1O43490 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.36□□□□□ -1.71
PROM1O43490 AL391684.1-202ENST00000641293 1636 ntBASIC4.36□□□□□ -1.71
PROM1O43490 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PROM1O43490 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PROM1O43490 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
PROM1O43490 Y_RNA.38-201ENST00000362617 102 ntBASIC4.36□□□□□ -1.71
PROM1O43490 Y_RNA.89-201ENST00000363031 102 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNU6-1085P-201ENST00000363576 107 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNU6-853P-201ENST00000364306 107 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNU6-744P-201ENST00000365557 107 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNU6-877P-201ENST00000383868 107 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNU6-1316P-201ENST00000384242 108 ntBASIC4.36□□□□□ -1.71
PROM1O43490 MT-TL1-201ENST00000386347 75 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNA5SP332-201ENST00000391063 115 ntBASIC4.36□□□□□ -1.71
PROM1O43490 SDHCP2-201ENST00000398565 501 ntBASIC4.36□□□□□ -1.71
PROM1O43490 MIR921-201ENST00000401133 56 ntBASIC4.36□□□□□ -1.71
PROM1O43490 MRPL42P2-201ENST00000403169 426 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.36□□□□□ -1.71
PROM1O43490 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.36□□□□□ -1.71
PROM1O43490 MTCYBP45-201ENST00000435243 565 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AC098614.3-201ENST00000438957 440 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.36□□□□□ -1.71
PROM1O43490 CBX1P1-201ENST00000440184 427 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.36□□□□□ -1.71
PROM1O43490 RPS20P32-201ENST00000456044 356 ntBASIC4.36□□□□□ -1.71
PROM1O43490 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.36□□□□□ -1.71
PROM1O43490 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.36□□□□□ -1.71
PROM1O43490 AC091153.1-201ENST00000466297 402 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AC007537.2-201ENST00000472093 511 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AC104563.1-201ENST00000476147 376 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.36□□□□□ -1.71
PROM1O43490 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.36□□□□□ -1.71
PROM1O43490 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.36□□□□□ -1.71
PROM1O43490 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.36□□□□□ -1.71
PROM1O43490 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PROM1O43490 SNORA20.3-201ENST00000516880 132 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNU6-714P-201ENST00000516963 103 ntBASIC4.36□□□□□ -1.71
PROM1O43490 HSPA8P13-201ENST00000523715 472 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.36□□□□□ -1.71
PROM1O43490 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.36□□□□□ -1.71
PROM1O43490 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.36□□□□□ -1.71
PROM1O43490 AL157687.1-201ENST00000554853 619 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.36□□□□□ -1.71
PROM1O43490 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PROM1O43490 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.36□□□□□ -1.71
PROM1O43490 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.36□□□□□ -1.71
PROM1O43490 AC012507.3-201ENST00000603556 477 ntBASIC4.36□□□□□ -1.71
PROM1O43490 LLPHP1-201ENST00000603571 367 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AC007363.1-201ENST00000604736 620 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AL390208.1-201ENST00000605885 644 ntBASIC4.36□□□□□ -1.71
PROM1O43490 AC009994.1-201ENST00000606889 253 ntBASIC4.36□□□□□ -1.71
PROM1O43490 RNU6-87P-201ENST00000607561 108 ntBASIC4.36□□□□□ -1.71
PROM1O43490 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.36□□□□□ -1.71
PROM1O43490 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.36□□□□□ -1.71
PROM1O43490 EOGT-210ENST00000615922 1931 ntBASIC4.36□□□□□ -1.71
PROM1O43490 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
PROM1O43490 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PROM1O43490 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 AC097504.1-201ENST00000515103 2415 ntBASIC4.35□□□□□ -1.71
PROM1O43490 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
PROM1O43490 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PROM1O43490 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PROM1O43490 RN7SKP44-201ENST00000363602 316 ntBASIC4.35□□□□□ -1.71
PROM1O43490 RNU6-534P-201ENST00000364877 106 ntBASIC4.35□□□□□ -1.71
PROM1O43490 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
PROM1O43490 MIR124-3-201ENST00000384866 87 ntBASIC4.35□□□□□ -1.71
PROM1O43490 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms