Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
EIF3FO00303 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
EIF3FO00303 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
EIF3FO00303 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.1□□□□□ -1.75
EIF3FO00303 AC009902.3-201ENST00000606235 2172 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.1□□□□□ -1.75
EIF3FO00303 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
EIF3FO00303 RNU6-50P-201ENST00000362356 103 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 RNU6-1078P-201ENST00000364522 103 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.1□□□□□ -1.75
EIF3FO00303 AL445669.1-201ENST00000426743 755 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.1□□□□□ -1.75
EIF3FO00303 AC079780.1-201ENST00000428259 207 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 MED14P1-201ENST00000430517 648 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 CYCSP43-201ENST00000438233 310 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 FAM103A2P-201ENST00000444122 354 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 RPS17P13-201ENST00000448974 407 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.1□□□□□ -1.75
EIF3FO00303 AP1S2P1-201ENST00000457344 379 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 RPL23AP62-201ENST00000463396 453 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 RN7SL330P-201ENST00000469709 307 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 BET1P1-201ENST00000482276 359 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 RN7SL271P-201ENST00000487601 295 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.1□□□□□ -1.75
EIF3FO00303 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EIF3FO00303 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.1□□□□□ -1.75
EIF3FO00303 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.1□□□□□ -1.75
EIF3FO00303 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.1□□□□□ -1.75
EIF3FO00303 AC106038.2-201ENST00000520706 568 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
EIF3FO00303 AC009643.1-201ENST00000532030 391 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.1□□□□□ -1.75
EIF3FO00303 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.1□□□□□ -1.75
EIF3FO00303 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.1□□□□□ -1.75
EIF3FO00303 ZNF192P1-203ENST00000565888 810 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.1□□□□□ -1.75
EIF3FO00303 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.1□□□□□ -1.75
EIF3FO00303 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.1□□□□□ -1.75
EIF3FO00303 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.1□□□□□ -1.75
EIF3FO00303 PRELID3BP8-201ENST00000604148 295 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AC012443.1-201ENST00000605605 231 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AL158211.4-201ENST00000606988 584 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AL392048.1-201ENST00000613946 534 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.1□□□□□ -1.75
EIF3FO00303 AC092628.2-201ENST00000622492 339 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AC091965.5-201ENST00000624785 342 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 AC092192.1-201ENST00000633154 1018 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.1□□□□□ -1.75
EIF3FO00303 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
EIF3FO00303 AC024560.2-201ENST00000507981 1497 ntBASIC4.1□□□□□ -1.75
EIF3FO00303 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
EIF3FO00303 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
EIF3FO00303 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EIF3FO00303 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EIF3FO00303 AC011460.1-201ENST00000636268 1834 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
EIF3FO00303 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EIF3FO00303 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
EIF3FO00303 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.09□□□□□ -1.75
EIF3FO00303 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
EIF3FO00303 RNA5SP322-201ENST00000363617 119 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 Y_RNA.548-201ENST00000384656 105 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 AL136372.1-201ENST00000403060 228 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 TPMTP3-201ENST00000411928 735 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 MTND1P21-201ENST00000412991 285 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.09□□□□□ -1.75
EIF3FO00303 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
EIF3FO00303 AL389915.1-201ENST00000422463 466 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 OR8F1P-201ENST00000425243 930 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 RPL37P21-201ENST00000435890 276 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 AL512286.1-201ENST00000439244 400 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.09□□□□□ -1.75
EIF3FO00303 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.09□□□□□ -1.75
EIF3FO00303 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.09□□□□□ -1.75
EIF3FO00303 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.09□□□□□ -1.75
EIF3FO00303 SNORA31.8-201ENST00000516327 108 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.09□□□□□ -1.75
EIF3FO00303 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
EIF3FO00303 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.09□□□□□ -1.75
EIF3FO00303 RPL23AP87-202ENST00000573039 466 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 MIR3186-201ENST00000577404 85 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 MIR4307-201ENST00000582802 84 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 WISP1-OT1-201ENST00000602893 642 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 AP000403.1-201ENST00000603349 851 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 MIR378J-201ENST00000611988 109 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 AC009268.2-201ENST00000621925 457 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 MIR3653-201ENST00000625572 110 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 AC244258.1-201ENST00000637553 1071 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.09□□□□□ -1.75
EIF3FO00303 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
EIF3FO00303 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
EIF3FO00303 AC012321.1-201ENST00000561622 1588 ntBASIC4.09□□□□□ -1.75
EIF3FO00303 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms