Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AP003117.2-201ENST00000606010 545 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL627309.6-201ENST00000606857 840 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL451074.6-201ENST00000608512 729 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC022079.2-201ENST00000619739 566 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 ZNF33CP-201ENST00000432492 2030 ntBASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.98□□□□□ -1.93
TMX2-CTNND1H3BSU7 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC022031.1-201ENST00000585985 2593 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 MIR22-201ENST00000362190 85 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 RNU6-1339P-201ENST00000363574 91 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL603865.2-201ENST00000401679 213 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 OR2AS1P-201ENST00000427827 319 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 NEK4P1-201ENST00000433383 879 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 HMGB1P12-201ENST00000438594 598 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC108734.1-201ENST00000439549 399 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC092170.1-201ENST00000440211 356 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 HMGB3P6-201ENST00000444896 598 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC016696.1-201ENST00000446949 318 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 RPS4XP13-201ENST00000483219 789 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 RPL31P13-201ENST00000484151 370 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC087894.1-201ENST00000538359 518 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 ZNF971P-201ENST00000562068 1249 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 MIR4474-201ENST00000579189 78 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC090330.1-201ENST00000588646 764 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 RPL12P50-201ENST00000603116 116 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC012119.1-201ENST00000603184 222 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC006023.1-201ENST00000603944 259 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC069431.2-201ENST00000604149 1099 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC007998.5-201ENST00000622938 237 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AP003485.1-201ENST00000625093 753 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 BX649567.1-201ENST00000642071 1134 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 AC004944.1-201ENST00000517807 3059 ntBASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
TMX2-CTNND1H3BSU7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
TMX2-CTNND1H3BSU7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.96□□□□□ -1.93
TMX2-CTNND1H3BSU7 AL049737.1-201ENST00000413920 1403 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL512646.1-201ENST00000269395 1077 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU5E-10P-201ENST00000363506 118 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 RNU6-77P-201ENST00000410554 91 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 RPL32P35-201ENST00000415214 394 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL009174.1-201ENST00000426577 416 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC092754.2-201ENST00000463506 460 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC015724.1-201ENST00000478577 156 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 RPS27P23-201ENST00000487608 251 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC008427.1-201ENST00000503102 655 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 PRELID3BP6-201ENST00000503839 571 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 SNORA19.3-201ENST00000516165 130 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 RN7SKP283-201ENST00000517197 270 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 COX6B1P6-201ENST00000522347 255 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 CYB5AP5-201ENST00000549779 389 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 OR4U1P-201ENST00000554958 912 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AP005205.1-201ENST00000563503 508 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL022067.1-201ENST00000602426 454 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL020997.3-201ENST00000602843 359 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 PRELID3BP8-201ENST00000604148 295 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC016877.3-201ENST00000606778 504 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC097504.2-201ENST00000608088 454 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 ATP5A1P2-202ENST00000616464 443 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 VN1R7P-201ENST00000619242 903 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC090772.4-201ENST00000623599 362 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AP003476.1-201ENST00000623984 516 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AC092608.3-201ENST00000625017 386 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 AL445984.1-201ENST00000637834 659 ntBASIC2.96□□□□□ -1.94
TMX2-CTNND1H3BSU7 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms