Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 NACA3P-201ENST00000359690 648 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 RNU6-335P-201ENST00000364563 113 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 RNU6-837P-201ENST00000391056 108 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 TAF9BP1-201ENST00000396646 746 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 TOMM22P1-201ENST00000418578 312 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 USP9YP24-201ENST00000434374 697 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 HMGB3P11-201ENST00000440127 604 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AL645638.1-201ENST00000440519 361 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 USP9YP17-201ENST00000444617 696 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 MTCYBP11-201ENST00000447254 1109 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AC007327.1-201ENST00000447461 264 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 RPS20P24-201ENST00000457473 361 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 NUP58P1-201ENST00000502546 1738 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AC110794.1-201ENST00000505816 425 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 RN7SKP60-201ENST00000516985 239 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AL132857.1-201ENST00000555180 708 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AADACP1-206ENST00000561502 1193 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 MIR5680-201ENST00000577577 84 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 MIR2682-201ENST00000580305 110 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 BNIP3P26-201ENST00000600827 554 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AC006329.2-201ENST00000611491 394 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 AL157817.1-201ENST00000614264 790 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 CYP3A51P-201ENST00000633513 256 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 PWAR6-201ENST00000552334 4618 ntBASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
YJEFN3A6XGL0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 MTCO1P23-201ENST00000415223 1526 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 SNORA31-201ENST00000362607 130 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 RNA5SP258-201ENST00000362750 119 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 RNU6-560P-201ENST00000364007 108 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 SNRPEP2-201ENST00000397592 279 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 RPL31P1-201ENST00000398116 372 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AL138880.1-201ENST00000405824 642 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 RNA5SP80-201ENST00000410475 111 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 HSFY1P1-201ENST00000423928 1178 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AC010401.1-201ENST00000463867 348 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 RN7SL807P-201ENST00000470923 297 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 FTH1P9-201ENST00000513251 355 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 RNA5SP309-201ENST00000516670 106 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AP001636.2-201ENST00000525517 696 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 MTCYBP41-201ENST00000528913 1123 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AP004242.1-201ENST00000533701 349 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AC023813.2-201ENST00000564321 469 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 BNIP3P22-201ENST00000593399 556 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 YPEL5P2-201ENST00000605553 359 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 RMST_8.1-201ENST00000610287 165 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AC092650.2-201ENST00000619984 902 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 U6.101-201ENST00000637707 76 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 AC066616.2-201ENST00000559334 1481 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 CDR1-202ENST00000625883 1485 ntBASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
YJEFN3A6XGL0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
YJEFN3A6XGL0 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
YJEFN3A6XGL0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
YJEFN3A6XGL0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.38□□□□□ -1.87
YJEFN3A6XGL0 SNORD116.1-201ENST00000365628 92 ntBASIC3.38□□□□□ -1.87
YJEFN3A6XGL0 U3.19-201ENST00000390893 196 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms