Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 AC138915.3-201ENST00000562908 1389 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.25□□□□□ -1.57
CCDC85CA6NKD9 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 Y_RNA.88-201ENST00000363029 99 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 RNU11-201ENST00000387069 134 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 FCF1P1-201ENST00000432690 571 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 MTCO3P18-201ENST00000440206 761 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 RPS17P13-201ENST00000448974 407 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 RPL31P58-201ENST00000469001 379 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 HMGN1P9-201ENST00000515212 298 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 RNU4-60P-201ENST00000517239 135 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC022616.3-201ENST00000523940 148 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 OR4P1P-201ENST00000530808 1136 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 MTCO3P24-201ENST00000572729 782 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 COX6CP3-201ENST00000580869 223 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AL360012.1-201ENST00000602813 131 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 LLPHP1-201ENST00000603571 367 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AP001330.5-201ENST00000607176 411 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC131238.1-201ENST00000617135 328 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 MIR8059-201ENST00000620427 81 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AL592182.3-201ENST00000642132 3304 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 NXPH1-205ENST00000602349 1953 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AC093671.1-201ENST00000624981 2929 ntBASIC5.24□□□□□ -1.57
CCDC85CA6NKD9 AL031595.2-201ENST00000624215 19071 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC112198.2-201ENST00000426589 6996 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC010733.2-201ENST00000589496 5702 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 Y_RNA.159-201ENST00000363674 87 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 RNY4P16-201ENST00000364768 94 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 RNU6-108P-201ENST00000365558 107 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 SNORA20.2-201ENST00000383922 131 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 Y_RNA.402-201ENST00000383972 102 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 PTMAP5-201ENST00000393073 333 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 RPS7P15-201ENST00000415804 584 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 HMGB3P20-201ENST00000417997 600 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC137499.1-201ENST00000427602 88 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 CKS1BP5-201ENST00000434172 273 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC119618.1-201ENST00000434191 222 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AL512326.1-201ENST00000443050 721 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 WASF1P1-201ENST00000447560 1131 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC000111.2-201ENST00000448200 210 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 PPIAP3-201ENST00000450588 505 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC023194.1-201ENST00000493084 308 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 FAM92A1P2-202ENST00000504766 877 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 PRDX4P1-201ENST00000507189 574 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 RNA5SP337-201ENST00000517007 109 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC118273.2-201ENST00000532092 465 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AK6P1-201ENST00000540219 478 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 HSPE1P5-201ENST00000561489 272 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 MIR5685-201ENST00000579080 79 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 MIR5195-201ENST00000583555 115 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 AC025857.2-201ENST00000602711 238 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 MIR6852-201ENST00000621699 66 ntBASIC5.23□□□□□ -1.57
CCDC85CA6NKD9 MIR6715B-201ENST00000637172 77 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms