Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 RNU6-525P-201ENST00000363685 104 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 MIR887-201ENST00000401258 79 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 RNA5SP38-201ENST00000410750 119 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC006548.1-201ENST00000427470 102 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC109583.1-201ENST00000432156 268 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AL513043.1-201ENST00000439124 535 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 RPS24P13-201ENST00000442520 397 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC092685.1-201ENST00000447960 1243 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 RNA5SP367-201ENST00000516557 118 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 LARP7P3-201ENST00000579888 337 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 ZNF861P-201ENST00000588126 639 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC092474.3-201ENST00000603022 568 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC135178.6-201ENST00000605314 398 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC006386.2-201ENST00000624491 75 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC012005.1-201ENST00000624575 75 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 CR381572.1-201ENST00000625098 102 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AP003122.5-201ENST00000527668 3766 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 GABRG2-229ENST00000641017 3628 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AC233263.6-201ENST00000631132 1963 ntBASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRAV41A0A0B4J266 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC092593.1-201ENST00000515413 1815 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 RNU6-263P-201ENST00000363811 107 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC083799.1-201ENST00000366451 910 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 SNORA18.3-201ENST00000384122 132 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 MIR181A2-201ENST00000384863 110 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 RNU2-17P-201ENST00000410290 190 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 RNA5SP492-201ENST00000411330 114 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AL606495.1-201ENST00000422100 813 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 MTCYBP34-201ENST00000439552 670 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC107083.1-201ENST00000439643 279 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC093156.1-201ENST00000440382 670 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AL135938.1-201ENST00000443141 297 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AL590639.1-201ENST00000456484 337 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 RN7SL499P-201ENST00000481141 276 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AP001025.2-201ENST00000490908 477 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 HIGD1AP13-201ENST00000509878 289 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC093014.1-201ENST00000548926 724 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC245036.5-201ENST00000596330 847 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 DPRXP5-201ENST00000604662 539 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC079610.2-201ENST00000604818 690 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AL359198.2-201ENST00000611836 194 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 AC073348.1-201ENST00000623002 331 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.2□□□□□ -2.06
TRAV41A0A0B4J266 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 Y_RNA.493-201ENST00000384422 102 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 AL589655.1-201ENST00000405398 482 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 RPS3AP9-201ENST00000417027 792 ntBASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV41A0A0B4J266 ARL2BPP3-201ENST00000421226 480 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms