Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IFT52Q9Y366 ZNF807-201ENST00000328088 1707 ntBASIC3.16□□□□□ -1.9
IFT52Q9Y366 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
IFT52Q9Y366 MTND5P19-201ENST00000424872 1794 ntBASIC3.15□□□□□ -1.9
IFT52Q9Y366 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 RNU6-582P-201ENST00000362989 107 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 RNU6-251P-201ENST00000363235 104 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 RNA5SP515-201ENST00000364570 118 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 RNU1-101P-201ENST00000391171 127 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 U3.29-201ENST00000391296 212 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 Z99755.1-201ENST00000414048 380 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 FCF1P2-201ENST00000415284 583 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 RPL31P54-201ENST00000429803 370 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AL035246.1-201ENST00000433554 1255 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC011242.1-201ENST00000433596 1158 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 ACTR3P3-201ENST00000480448 893 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 GAPDHP39-201ENST00000481866 979 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC084024.2-201ENST00000503480 791 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC112198.1-201ENST00000505369 1220 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
IFT52Q9Y366 PRELID3BP5-201ENST00000508612 460 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 MTATP6P9-201ENST00000515039 680 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 RNU1-95P-201ENST00000516357 160 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 RNU6-885P-201ENST00000516607 104 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 RNU1-128P-201ENST00000516704 160 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 PAICSP4-201ENST00000517543 1253 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC091163.3-201ENST00000518269 1144 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC023632.1-201ENST00000518463 375 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 MTCO3P15-201ENST00000526563 574 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC084824.1-201ENST00000550917 1005 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 EEF1B2P4-201ENST00000551398 348 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 MTCO3P24-201ENST00000572729 782 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC078899.3-201ENST00000599065 212 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC011458.1-201ENST00000604034 617 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC055876.5-201ENST00000605667 259 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AL583856.2-201ENST00000606298 543 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC068831.7-201ENST00000616954 363 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AL391262.2-201ENST00000622466 494 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 MIR6810-201ENST00000622701 70 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AC084035.1-201ENST00000634543 607 ntBASIC3.15□□□□□ -1.91
IFT52Q9Y366 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
IFT52Q9Y366 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
IFT52Q9Y366 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
IFT52Q9Y366 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 RNU6-839P-201ENST00000363347 108 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 MIR217-201ENST00000384817 110 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 CYCSP45-201ENST00000402289 315 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 RNU6ATAC-201ENST00000408749 126 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 AL449283.1-202ENST00000418249 604 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC012065.2-201ENST00000421295 375 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 SETP8-201ENST00000435341 628 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 YWHAZP7-201ENST00000436906 631 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 MRPL42P4-201ENST00000453267 443 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 snoU109.4-201ENST00000458953 143 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC096571.1-202ENST00000506634 735 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 FCF1P8-201ENST00000510322 597 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 SNRPGP16-201ENST00000533275 226 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC044913.1-201ENST00000557200 430 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 AC124312.4-201ENST00000605533 310 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
IFT52Q9Y366 LRRC77P-213ENST00000637727 880 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
IFT52Q9Y366 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
IFT52Q9Y366 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 AL645937.1-201ENST00000641739 1652 ntBASIC3.14□□□□□ -1.91
IFT52Q9Y366 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
IFT52Q9Y366 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
IFT52Q9Y366 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
IFT52Q9Y366 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
IFT52Q9Y366 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
IFT52Q9Y366 OR5H2-201ENST00000355273 945 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms