Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RPL7P26-201ENST00000333817 754 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 MIR128-1-201ENST00000384921 82 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 RNU6-821P-201ENST00000390995 107 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AL138885.1-201ENST00000405921 675 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 RNA5SP129-201ENST00000410276 118 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AL512637.2-201ENST00000431287 1256 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 RPL23AP16-201ENST00000441715 421 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AL096829.2-201ENST00000446582 742 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 MTCO3P2-201ENST00000457365 171 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 DSTNP2-201ENST00000504533 515 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 MTCYBP37-201ENST00000510642 1133 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 RNA5SP217-201ENST00000515959 91 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AP001207.2-201ENST00000519490 539 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 ARL2BPP5-201ENST00000523141 481 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 ZNF705CP-201ENST00000530515 889 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AP002404.1-201ENST00000532005 451 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AL121603.1-201ENST00000553815 142 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC008507.1-201ENST00000587506 734 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 XIAPP1-201ENST00000603162 600 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC128687.1-201ENST00000605304 619 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC093875.1-201ENST00000623688 504 ntBASIC3.29□□□□□ -1.88
CDH9Q9ULB4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CDH9Q9ULB4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 DEFB109C-201ENST00000382575 264 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 DEFB109B-201ENST00000382656 264 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 RNU6-468P-201ENST00000384003 109 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 SNORD116-23-201ENST00000384645 92 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC110754.1-201ENST00000399740 601 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 RN7SKP220-201ENST00000410611 288 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AL133384.1-201ENST00000412744 351 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 MTCO3P12-201ENST00000416718 547 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC245291.1-201ENST00000419501 328 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 FO393414.1-201ENST00000428697 1184 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC000041.1-201ENST00000439655 175 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AL592437.1-201ENST00000443781 492 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 SEPT14P24-201ENST00000447236 180 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC125238.1-201ENST00000448842 249 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 NECAP1P2-201ENST00000455668 727 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 RPS27P29-201ENST00000463110 252 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 S100A11P2-201ENST00000467589 312 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 ST13P14-201ENST00000474095 734 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC092185.1-201ENST00000491371 97 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC021146.5-201ENST00000503544 545 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 RNU1-143P-201ENST00000516296 146 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 RNA5SP135-201ENST00000517019 125 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 TRAV37-201ENST00000553906 342 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 GAS5-AS1-201ENST00000602767 694 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 U1.23-201ENST00000610293 146 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 RNU1-68P-201ENST00000615382 146 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 AC078880.5-201ENST00000617845 421 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 U1.39-201ENST00000621562 146 ntBASIC3.28□□□□□ -1.88
CDH9Q9ULB4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.28□□□□□ -1.88
CDH9Q9ULB4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 AL079305.1-201ENST00000623159 3008 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH9Q9ULB4 RPL23AP57-201ENST00000332361 466 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 Y_RNA.110-201ENST00000363220 99 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 SNORA71.1-201ENST00000364523 117 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 RNU6-207P-201ENST00000384137 107 ntBASIC3.27□□□□□ -1.89
CDH9Q9ULB4 SNORA54-201ENST00000384281 123 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms