Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 RPS29P2-201ENST00000479278 136 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 RN7SL271P-201ENST00000487601 295 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 HMGN1P11-201ENST00000508668 303 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 RNU6-352P-201ENST00000516908 107 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 RPL12P22-201ENST00000519073 490 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC008802.1-201ENST00000519121 791 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC092851.1-201ENST00000535964 478 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 YPEL5P3-201ENST00000547227 352 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 MTND6P33-201ENST00000571794 183 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC103987.3-201ENST00000582071 292 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC122108.2-201ENST00000611946 526 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC243773.3-201ENST00000613270 256 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 AC004825.2-201ENST00000616634 455 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 MIR7154-201ENST00000620673 73 ntBASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.77□□□□□ -1.65
HDAC9Q9UKV0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 RNU4-21P-201ENST00000362802 126 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 RNU6-660P-201ENST00000364566 109 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 RPL7P8-201ENST00000411964 730 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AL589823.1-201ENST00000429577 183 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 RPL39P6-201ENST00000448289 150 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 SNRPGP5-201ENST00000456003 220 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC092757.1-201ENST00000467293 467 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC010301.1-201ENST00000473936 355 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC104057.1-201ENST00000515547 497 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC023161.2-201ENST00000551218 780 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC136618.2-201ENST00000575091 400 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC087499.8-201ENST00000578406 226 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC008507.1-201ENST00000587506 734 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 MTCYBP22-201ENST00000603788 447 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AC092354.1-201ENST00000606057 376 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 OR4G11P-202ENST00000642116 1414 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 AL079343.1-201ENST00000572358 1771 ntBASIC4.76□□□□□ -1.65
HDAC9Q9UKV0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 RNA5SP399-201ENST00000364003 117 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 RNA5SP88-201ENST00000365560 109 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 SNRPEP2-201ENST00000397592 279 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 RPL23AP48-201ENST00000406913 488 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 ZNF885P-201ENST00000420174 1098 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 AL139247.1-201ENST00000422768 325 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 UBE2FP3-201ENST00000436366 524 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 RPL23AP16-201ENST00000441715 421 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 VN1R10P-201ENST00000447106 875 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 KATNBL1P6-201ENST00000453433 915 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 ZNF114P1-201ENST00000453500 292 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 RN7SL293P-201ENST00000481765 281 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 AC005726.1-201ENST00000494679 427 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 AC023141.12-201ENST00000512399 199 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 MTCYBP43-201ENST00000513621 740 ntBASIC4.75□□□□□ -1.65
HDAC9Q9UKV0 AC060788.1-201ENST00000521318 469 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms