Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
APOBEC3BQ9UH17 MTND4P34-201ENST00000572715 1371 ntBASIC3.24□□□□□ -1.89
APOBEC3BQ9UH17 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
APOBEC3BQ9UH17 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 RNU4-51P-201ENST00000364206 140 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 RNU2-21P-201ENST00000410368 188 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC009237.2-201ENST00000421358 284 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 NANOGP2-201ENST00000435391 727 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC112492.1-201ENST00000449607 712 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 MRPS31P2-201ENST00000451581 518 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 HMGN2P16-201ENST00000456802 261 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 ARPC3P2-201ENST00000457786 533 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AP001992.1-205ENST00000462248 379 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC134050.1-201ENST00000495088 933 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 DYNLL1P6-201ENST00000503440 264 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC084024.2-201ENST00000503480 791 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC048346.1-201ENST00000510247 144 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC005351.1-201ENST00000511152 786 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 RNU6-885P-201ENST00000516607 104 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AGGF1P5-201ENST00000567900 919 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 MTND3P13-201ENST00000574391 343 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 MIR3690-201ENST00000580266 75 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 VN1R83P-201ENST00000595685 445 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 MTND3P19-201ENST00000603825 345 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC106052.1-201ENST00000608029 497 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC107081.3-201ENST00000612715 2034 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AL162274.2-201ENST00000614406 332 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 RIOK3P1-201ENST00000418778 1528 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 AF117829.1-206ENST00000621883 3802 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 XPOTP1-201ENST00000443317 2398 ntBASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
APOBEC3BQ9UH17 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC017071.1-201ENST00000564407 2204 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 MIR30E-201ENST00000362104 92 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 MIR634-201ENST00000385208 97 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 DSTNP4-201ENST00000399472 474 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 RNU2-71P-201ENST00000411395 189 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 RPP40P1-201ENST00000426762 456 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 TRIAP1P1-201ENST00000427062 225 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC127537.2-201ENST00000439258 465 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 HMGB3P6-201ENST00000444896 598 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC092155.2-201ENST00000454675 477 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 snoU13.7-201ENST00000459220 104 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 RPS3AP43-201ENST00000479743 781 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC069528.1-202ENST00000482888 637 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC006483.1-201ENST00000487308 313 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC020893.1-201ENST00000502452 580 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 TGIF1P1-201ENST00000558095 802 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC106782.4-201ENST00000568264 210 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC090616.5-202ENST00000582111 297 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AC015688.2-201ENST00000584523 262 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 HSPE1P14-201ENST00000605812 302 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 HMGN2P28-201ENST00000606102 262 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AL355816.2-201ENST00000610049 647 ntBASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.22□□□□□ -1.89
APOBEC3BQ9UH17 AL359535.1-201ENST00000612100 1087 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms