Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC011447.4-201ENST00000587562 111 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC008814.1-201ENST00000603797 406 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AL162431.4-201ENST00000604674 411 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AL022394.1-201ENST00000606979 292 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 AL353662.3-201ENST00000625131 237 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 OR52H1-202ENST00000641796 1061 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 SAGE4P-201ENST00000442271 3381 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 AC092376.2-201ENST00000622621 4116 ntBASIC5.69□□□□□ -1.5
CNTN3Q9P232 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTN3Q9P232 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTN3Q9P232 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 RNU6-1188P-201ENST00000363795 107 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 RNU6-574P-201ENST00000384265 107 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 AL645927.1-201ENST00000396783 406 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AL049697.2-201ENST00000403708 294 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 PRPF38AP2-201ENST00000438179 851 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC091685.2-201ENST00000454924 864 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC022034.3-201ENST00000471393 478 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AP000797.2-201ENST00000475768 606 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 RN7SL808P-201ENST00000496066 299 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 RNU6-976P-201ENST00000516086 111 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC012400.1-201ENST00000518452 381 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC022360.1-201ENST00000521058 340 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 MIR4503-201ENST00000582187 83 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 MIR4443-201ENST00000585052 53 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC022893.3-201ENST00000607665 437 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AL627230.1-201ENST00000613077 211 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AL157817.1-201ENST00000614264 790 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC068870.2-201ENST00000620635 389 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC055839.1-201ENST00000634467 498 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTN3Q9P232 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CNTN3Q9P232 AC114947.2-201ENST00000565748 2125 ntBASIC5.68□□□□□ -1.5
CNTN3Q9P232 BDP1P-201ENST00000582658 1990 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTN3Q9P232 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNTN3Q9P232 AL442639.1-201ENST00000625030 1899 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 Y_RNA.452-201ENST00000384202 108 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 RNU6-308P-201ENST00000390957 107 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 EIF4E2P1-201ENST00000393781 255 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 CISD1P1-201ENST00000393907 327 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AL139397.2-201ENST00000404529 772 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 MIR1182-201ENST00000408363 97 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 Y_RNA.605-201ENST00000410577 105 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 RNU6-387P-201ENST00000411331 105 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 RNU6-1304P-201ENST00000411374 106 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 RPL23AP38-201ENST00000423801 469 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 GAPDHP58-201ENST00000438477 1006 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC127537.2-201ENST00000439258 465 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AL031584.1-201ENST00000447169 754 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AL162395.1-201ENST00000457882 422 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 RN7SL329P-201ENST00000467740 299 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 RPS27P27-201ENST00000498779 255 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 PTP4A1P4-201ENST00000512479 322 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC006427.1-201ENST00000514359 712 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 RNU6-256P-201ENST00000516747 97 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 FAM60DP-201ENST00000524174 632 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 AL133153.1-201ENST00000557756 303 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC124068.1-201ENST00000563131 678 ntBASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.67□□□□□ -1.5
CNTN3Q9P232 AC069061.3-201ENST00000582254 823 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms