Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 AL513175.2-201ENST00000422071 443 ntBASIC2.38□□□□□ -2.03
CCDC88CQ9P219 TRIM60P18-201ENST00000441518 828 ntBASIC2.38□□□□□ -2.03
CCDC88CQ9P219 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 SNORD53-201ENST00000579969 78 ntBASIC2.38□□□□□ -2.03
CCDC88CQ9P219 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 NF1P10-201ENST00000613227 742 ntBASIC2.38□□□□□ -2.03
CCDC88CQ9P219 uc_338.9-201ENST00000617424 182 ntBASIC2.38□□□□□ -2.03
CCDC88CQ9P219 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 TAB3P1-202ENST00000452645 1634 ntBASIC2.38□□□□□ -2.03
CCDC88CQ9P219 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CCDC88CQ9P219 RNVU1-3-201ENST00000364313 161 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 AL590290.1-201ENST00000405336 380 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 RPS4XP7-201ENST00000406274 780 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 RPL34P26-201ENST00000445636 354 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 HSPE1P6-201ENST00000479457 291 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 AC008413.1-201ENST00000511864 177 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 RNU6-1308P-201ENST00000516817 103 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 AC007621.1-201ENST00000604544 437 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 HMGB1P51-201ENST00000605166 638 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 AP000567.1-201ENST00000406413 156 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 AC009961.3-201ENST00000449832 765 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 SNORA31.26-201ENST00000517250 137 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 AC139769.3-201ENST00000618383 175 ntBASIC2.37□□□□□ -2.03
CCDC88CQ9P219 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC88CQ9P219 AC011978.2-201ENST00000569835 2054 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 DNAJC19P6-201ENST00000401853 280 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 RPL21P112-201ENST00000434403 463 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 OR7L1P-201ENST00000456181 380 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AC026436.1-201ENST00000510537 270 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AC010486.1-201ENST00000511793 424 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 RN7SKP96-201ENST00000516948 297 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AP000867.2-201ENST00000532468 320 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AC090695.1-201ENST00000561269 1222 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AC009159.1-201ENST00000618386 642 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AC025034.2-201ENST00000623264 286 ntBASIC2.36□□□□□ -2.03
CCDC88CQ9P219 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC88CQ9P219 RNU6-819P-201ENST00000364116 107 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 SNORA41-201ENST00000384675 132 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 FCF1P1-201ENST00000432690 571 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 RPL21P2-201ENST00000440049 481 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC104308.1-201ENST00000454621 333 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 OR6K1P-201ENST00000456766 971 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC133134.1-201ENST00000466800 359 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC010928.3-201ENST00000587712 541 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AP003117.2-201ENST00000606010 545 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 Z99129.2-201ENST00000619967 314 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AL162578.1-201ENST00000406202 378 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AL139413.1-201ENST00000421309 217 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 AC109583.1-201ENST00000432156 268 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CCDC88CQ9P219 HMGN2P20-201ENST00000437531 273 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 RPS7P5-201ENST00000441482 581 ntBASIC2.35□□□□□ -2.03
CCDC88CQ9P219 ARL5AP2-201ENST00000444698 533 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms