Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL353662.1-201ENST00000439099 327 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 NOTCH2P1-201ENST00000443481 624 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 IGHV5-78-201ENST00000450948 295 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 MTCO3P8-201ENST00000453691 755 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RPL9P32-201ENST00000464118 620 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RPL21P8-201ENST00000465083 535 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 DYNLL1P5-201ENST00000467158 270 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RN7SL629P-201ENST00000489622 285 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RNU4-71P-201ENST00000516258 113 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RNA5SP271-201ENST00000516700 88 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 IGKV3D-25-201ENST00000519599 235 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 WBP1LP3-201ENST00000523033 208 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 HNRNPCP4-201ENST00000571636 900 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RAC1P9-201ENST00000604990 392 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 U2.17-201ENST00000611454 95 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 FAM27E2-201ENST00000619668 403 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 AC008669.1-201ENST00000565823 2178 ntBASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUEDC1Q9NWM3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 Y_RNA.126-201ENST00000363382 111 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 SNORA51.9-201ENST00000384295 124 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 RNU6-95P-201ENST00000384697 107 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 RN7SKP151-201ENST00000410230 316 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 HMGN1P24-201ENST00000412282 298 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 RPLP0P7-201ENST00000416050 667 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 RPL7P37-201ENST00000425095 738 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 MTND6P12-201ENST00000428247 522 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 USP9YP30-201ENST00000430729 455 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 NDUFB1P2-201ENST00000449477 176 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC104164.1-201ENST00000460282 590 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 RPL37P6-202ENST00000464216 403 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC104472.2-201ENST00000469035 601 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC020893.1-201ENST00000502452 580 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 SNORA14.1-201ENST00000516113 141 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 RN7SKP234-201ENST00000517173 224 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC079600.1-201ENST00000550326 297 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC106782.4-201ENST00000568264 210 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC068768.2-201ENST00000602352 343 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AL596245.1-201ENST00000618994 362 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC130454.1-201ENST00000622948 401 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AC004656.1-201ENST00000568479 4951 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AL731532.1-201ENST00000623972 4236 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AL592437.2-201ENST00000421655 2434 ntBASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
CUEDC1Q9NWM3 AP005435.3-201ENST00000531260 3198 ntBASIC5.85□□□□□ -1.47
CUEDC1Q9NWM3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms