Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC126755.2-208ENST00000327792 462 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC138969.1-213ENST00000331436 462 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 SNORA70.2-201ENST00000364506 135 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 MIR554-201ENST00000384874 96 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 ZNF90P2-204ENST00000419323 1075 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 MTATP6P11-201ENST00000428071 670 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC005300.1-201ENST00000428401 373 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 MRPS33P4-201ENST00000434892 317 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AL591503.2-201ENST00000442314 1005 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC078857.1-201ENST00000469870 667 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 GAPDHP39-201ENST00000481866 979 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC002456.2-201ENST00000509356 380 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC010285.3-201ENST00000511668 676 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 RNU6-943P-201ENST00000516960 98 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 HSPE1P3-201ENST00000559254 309 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 MIR5002-201ENST00000584713 97 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 AF230666.2-201ENST00000602328 725 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 U73023.1-201ENST00000603134 700 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 MIR6766-201ENST00000622641 72 ntBASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SMCO4Q9NRQ5 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AL589994.1-201ENST00000404962 340 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AL138885.1-201ENST00000405921 675 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 EEF1A1P41-201ENST00000414667 207 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AL512504.1-201ENST00000415494 778 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 MTCO3P30-201ENST00000426425 670 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC005326.1-201ENST00000429197 123 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 HMGB1P5-202ENST00000451497 985 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC034159.1-201ENST00000513885 583 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC096725.1-201ENST00000514266 313 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 RNU1-45P-201ENST00000517191 141 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 MIR3122-201ENST00000577243 73 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 AC008739.2-201ENST00000597006 317 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 MIR7112-201ENST00000616126 65 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 ZNF519P1-201ENST00000449011 1626 ntBASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
SMCO4Q9NRQ5 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC009902.3-201ENST00000606235 2172 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 HMGB1P11-201ENST00000413899 637 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC004975.1-201ENST00000428733 208 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AL159987.2-201ENST00000432754 307 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 RPS15AP28-201ENST00000435088 386 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 RPL23AP33-201ENST00000442301 452 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AL135752.1-201ENST00000479477 471 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC006499.5-201ENST00000505037 514 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC026427.2-201ENST00000506228 536 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC010306.1-201ENST00000523223 1117 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AP004247.3-201ENST00000608682 624 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AC007342.8-201ENST00000623278 678 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 MIR1291-201ENST00000627649 87 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 AL354685.2-201ENST00000448218 1447 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 CUL4AP1-201ENST00000514750 1863 ntBASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SMCO4Q9NRQ5 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
SMCO4Q9NRQ5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms