Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 SKINT1L-201ENST00000401057 817 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AL603865.2-201ENST00000401679 213 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AL133384.1-201ENST00000412744 351 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AL136133.1-201ENST00000413694 376 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC091390.3-201ENST00000426478 338 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 RPL21P66-201ENST00000426566 466 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 CFTRP1-201ENST00000456646 183 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 VN1R17P-201ENST00000472048 1090 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC084024.2-201ENST00000503480 791 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 RNU6-1231P-201ENST00000517185 103 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC023632.1-201ENST00000518463 375 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC103881.1-201ENST00000603476 538 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC099785.1-201ENST00000605697 437 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 AC006249.1-201ENST00000621223 471 ntBASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.53□□□□□ -1.84
VAT1LQ9HCJ6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
VAT1LQ9HCJ6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
VAT1LQ9HCJ6 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 OR5H2-201ENST00000355273 945 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 MIR217-201ENST00000384817 110 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 RPL7P25-201ENST00000404151 721 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 RPL5P18-201ENST00000406671 891 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AL133264.1-201ENST00000407157 562 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 RPS7P13-201ENST00000413955 498 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC092634.2-201ENST00000428146 1010 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 ARF4P4-201ENST00000439608 520 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 HMGN1P5-201ENST00000448591 263 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC244505.3-201ENST00000454598 187 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC010301.1-201ENST00000473936 355 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 ST13P14-201ENST00000474095 734 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 RPS4XP13-201ENST00000483219 789 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC011825.1-201ENST00000484967 388 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 RN7SL20P-201ENST00000488827 297 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC112198.4-201ENST00000515450 351 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 RN7SKP289-201ENST00000517244 295 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC019227.1-201ENST00000526902 510 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC044913.1-201ENST00000557200 430 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC008507.2-201ENST00000588402 1176 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AF131215.7-201ENST00000602443 707 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 BNIP3P11-201ENST00000603878 563 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AP003973.1-201ENST00000604639 691 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AL590282.1-201ENST00000610379 1136 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 AC006963.1-201ENST00000624003 1052 ntBASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
VAT1LQ9HCJ6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AC004972.1-201ENST00000623934 2209 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 RNA5SP258-201ENST00000362750 119 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 RPL7P27-201ENST00000403775 720 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 OR4K6P-201ENST00000416478 897 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AC241584.1-201ENST00000438469 1241 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AL662791.1-201ENST00000441992 928 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 RPS12P18-201ENST00000442381 270 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 RSL24D1P3-201ENST00000449255 495 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 NPM1P13-201ENST00000452663 865 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 RPS24P6-201ENST00000452670 400 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 MRPL42P4-201ENST00000453267 443 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AC006539.3-201ENST00000454258 129 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 RPL6P9-201ENST00000466502 859 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 PABPC1P3-201ENST00000469174 459 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 AC010285.1-201ENST00000470580 392 ntBASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.51□□□□□ -1.85
VAT1LQ9HCJ6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms