Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RNA5SP507-201ENST00000363603 121 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RNU4-66P-201ENST00000365199 138 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RNU4-48P-201ENST00000365559 182 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 MIR92A2-201ENST00000385299 75 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AL024474.1-201ENST00000404655 591 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RNU4-14P-201ENST00000410858 122 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 PRPF38AP2-201ENST00000438179 851 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RPS29P15-201ENST00000458329 171 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AL591473.1-201ENST00000464297 313 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 VN1R17P-201ENST00000472048 1090 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RPSAP50-201ENST00000481955 852 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RPL23AP41-201ENST00000484754 458 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 SNRPCP2-201ENST00000504370 475 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 SNORA25.17-201ENST00000517184 124 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 OR4P1P-201ENST00000530808 1136 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC128657.1-201ENST00000549459 145 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 NCAPGP2-201ENST00000557911 754 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC018552.3-201ENST00000567416 561 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC053481.3-201ENST00000577881 843 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AC006116.3-201ENST00000592968 361 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AL080274.1-201ENST00000605565 220 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 AL049794.2-201ENST00000616301 365 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 PANDAR-201ENST00000629595 1506 ntBASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.51□□□□□ -1.69
SEC61A2Q9H9S3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 OR1S2-201ENST00000302592 978 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 Y_RNA.234-201ENST00000364409 97 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 RNY3P13-201ENST00000365542 102 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 SNORA22B-201ENST00000383876 138 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 SNORA70-201ENST00000384436 135 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 MIR514A2-201ENST00000385131 88 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 MIR514A3-201ENST00000385132 88 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 MIR765-201ENST00000390226 114 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-308P-201ENST00000390957 107 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AL356057.3-201ENST00000402607 340 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 RNU6-193P-201ENST00000410977 107 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC113618.1-201ENST00000416747 285 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC104333.2-201ENST00000422630 192 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 HMGB3P11-201ENST00000440127 604 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 IPO7P1-201ENST00000442031 636 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 NANOGP10-201ENST00000453325 895 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC006511.1-201ENST00000470614 315 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC020893.1-201ENST00000502452 580 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 BNIP3P1-201ENST00000547295 580 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 APOOP1-201ENST00000604695 592 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AC211433.2-201ENST00000608433 387 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 AL121612.2-201ENST00000612261 482 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 MAPK10-320ENST00000641462 6696 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 MTND5P1-201ENST00000445440 1375 ntBASIC4.5□□□□□ -1.69
SEC61A2Q9H9S3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms