Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 PABPC1P9-201ENST00000426076 1612 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 PHKBP1-201ENST00000450951 1951 ntBASIC4.2□□□□□ -1.74
EBF3Q9H4W6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.2□□□□□ -1.74
EBF3Q9H4W6 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 SNORA60-201ENST00000362396 134 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 RNU6-1066P-201ENST00000363573 105 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 RNU6-374P-201ENST00000364146 108 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 RN7SKP226-201ENST00000364912 300 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 SUGT1P1-201ENST00000379514 476 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 CYCSP45-201ENST00000402289 315 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 RNU2-42P-201ENST00000410697 113 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 RPL31P54-201ENST00000429803 370 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 RPS25P9-201ENST00000435591 252 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 RPL23AP89-201ENST00000439324 255 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AL500522.2-201ENST00000448562 343 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 MTND5P20-201ENST00000448677 143 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 DNAJC19P1-201ENST00000455312 319 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 TMED11P-201ENST00000479478 690 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC017037.1-201ENST00000508460 471 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC063950.1-201ENST00000552036 308 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AL390816.3-201ENST00000604527 1066 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC098614.4-201ENST00000607601 462 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 AL079343.1-201ENST00000572358 1771 ntBASIC4.19□□□□□ -1.74
EBF3Q9H4W6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
EBF3Q9H4W6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 ERCC6-202ENST00000374127 1782 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 Y_RNA.18-201ENST00000362461 102 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 SNORA72.1-201ENST00000363485 129 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RNA5SP322-201ENST00000363617 119 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RNU6-213P-201ENST00000384051 104 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RNU6-1042P-201ENST00000384204 107 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 SNORD116-23-201ENST00000384645 92 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RNU6-114P-201ENST00000384704 105 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 MIR200C-201ENST00000384980 68 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RPS15AP38-201ENST00000413110 372 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RPL23AP39-201ENST00000415533 405 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AL358472.1-201ENST00000431295 329 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AL512286.1-201ENST00000439244 400 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 PAXBP1P1-201ENST00000449315 447 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RPS11P1-201ENST00000451072 473 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RNU6-1218P-201ENST00000458990 108 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 AC091564.1-201ENST00000464563 479 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RN7SL585P-201ENST00000470538 280 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RPL9P6-201ENST00000492764 598 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 RPL29P14-201ENST00000495837 428 ntBASIC4.18□□□□□ -1.74
EBF3Q9H4W6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.18□□□□□ -1.74
EBF3Q9H4W6 MIR2114-201ENST00000516645 80 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms