Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC022018.1-201ENST00000430685 241 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 RPL36P19-201ENST00000430744 301 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 EXOSC3P1-201ENST00000448649 500 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 NF1P3-201ENST00000457709 450 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC012170.1-201ENST00000495139 359 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 UBE2V1P12-201ENST00000503954 474 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC005351.1-201ENST00000511152 786 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC109471.1-201ENST00000511631 612 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 RNU6-488P-201ENST00000515918 99 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC074029.1-201ENST00000552531 1044 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AL160237.3-201ENST00000604114 1013 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC009237.15-201ENST00000610252 501 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AL592148.2-201ENST00000612210 372 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC118273.1-201ENST00000525324 3006 ntBASIC3.52□□□□□ -1.85
RNF41Q9H4P4 AC004972.1-201ENST00000623934 2209 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 RNU6-707P-201ENST00000364647 95 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 RNU6-851P-201ENST00000384565 107 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 RPL31P1-201ENST00000398116 372 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 MTCO2P8-201ENST00000412213 658 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC106883.1-201ENST00000418805 562 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 RPP40P1-201ENST00000426762 456 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 FTH1P1-201ENST00000437933 532 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 COX6CP18-201ENST00000448769 222 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC078785.3-201ENST00000476607 425 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AP001086.1-201ENST00000494882 321 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC083906.5-201ENST00000503722 328 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC048346.1-201ENST00000510247 144 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 RN7SKP43-201ENST00000516173 320 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 PTP4A1P6-201ENST00000531034 478 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC093732.2-201ENST00000607950 274 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AL138478.1-201ENST00000612252 832 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 MFSD8-245ENST00000641743 948 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.51□□□□□ -1.85
RNF41Q9H4P4 SAGE4P-201ENST00000442271 3381 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC005183.1-201ENST00000603687 1979 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 AC000367.1-201ENST00000452711 1766 ntBASIC3.51□□□□□ -1.85
RNF41Q9H4P4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 ZNF833P-201ENST00000424938 1494 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 OR5H2-201ENST00000355273 945 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 MIR148B-201ENST00000362252 99 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 SNORA9.2-201ENST00000365361 133 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 MIR128-1-201ENST00000384921 82 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 SNORA48.2-201ENST00000390926 124 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AL583834.1-201ENST00000406943 343 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 OR10R1P-201ENST00000441524 1141 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 NANOGNBP1-201ENST00000448444 480 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 Z99714.1-201ENST00000450463 807 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 RPS27P29-201ENST00000463110 252 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 RPS29P2-201ENST00000479278 136 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 RPS4XP13-201ENST00000483219 789 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC011825.1-201ENST00000484967 388 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC016065.2-201ENST00000514530 444 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 RNU6-415P-201ENST00000516252 97 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 Vault.1-201ENST00000516474 102 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 RNA5SP135-201ENST00000517019 125 ntBASIC3.5□□□□□ -1.85
RNF41Q9H4P4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms