Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBQLN3Q9H347 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBQLN3Q9H347 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.46□□□□□ -1.86
UBQLN3Q9H347 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBQLN3Q9H347 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UBQLN3Q9H347 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBQLN3Q9H347 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UBQLN3Q9H347 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 DEFB109C-201ENST00000382575 264 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 DEFB109B-201ENST00000382656 264 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RNU6-157P-201ENST00000383957 107 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RNU6-328P-201ENST00000390887 106 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RNU6-712P-201ENST00000410558 100 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AL159169.1-201ENST00000421119 127 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AL139247.1-201ENST00000422768 325 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AL590233.1-201ENST00000430017 456 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AL590103.1-201ENST00000434488 307 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AL445669.2-201ENST00000454425 421 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 SUMO2P2-201ENST00000456482 255 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 UBDP1-202ENST00000457888 382 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RPS4XP10-201ENST00000465034 731 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 HMGB1P25-201ENST00000468402 607 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC007537.2-201ENST00000472093 511 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC023424.2-201ENST00000493479 777 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AP002812.1-201ENST00000495378 474 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC021146.1-201ENST00000511202 716 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC006499.2-201ENST00000513470 337 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RNA5SP208-201ENST00000516156 78 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RN7SKP287-201ENST00000516546 266 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RNA5SP468-201ENST00000516782 93 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 DEFB131D-201ENST00000526803 184 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 PDCL2P2-201ENST00000533651 189 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC023050.2-201ENST00000544968 387 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 DUXAP1-201ENST00000556632 463 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC087465.1-201ENST00000560574 245 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 VN1R78P-201ENST00000597393 564 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RNU1-30P-201ENST00000606575 163 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
UBQLN3Q9H347 AC007256.1-201ENST00000392253 2765 ntBASIC3.45□□□□□ -1.86
UBQLN3Q9H347 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AL356473.1-201ENST00000406203 1408 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 TNPO1P3-201ENST00000436471 2662 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 PRO1804-201ENST00000623780 2050 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC024560.2-201ENST00000507981 1497 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 SNORD51-201ENST00000384320 80 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 SNORA48.7-201ENST00000391302 135 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 RAB9AP3-201ENST00000412737 573 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC127526.1-201ENST00000417526 366 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 SNORA71B-202ENST00000439232 272 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 RAB9AP1-201ENST00000449393 573 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 snoU109.4-201ENST00000458953 143 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 ACTR3P3-201ENST00000480448 893 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 RAC1P2-201ENST00000511164 579 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 PAICSP4-201ENST00000517543 1253 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC022695.1-201ENST00000522089 237 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 CYCSP2-201ENST00000558168 301 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC087481.2-201ENST00000565492 330 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 MTATP6P24-201ENST00000576835 677 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 MIR5186-201ENST00000577504 120 ntBASIC3.44□□□□□ -1.86
UBQLN3Q9H347 AC053481.3-201ENST00000577881 843 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms