Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AL136380.1-201ENST00000447970 162 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 RPS20P32-201ENST00000456044 356 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 RNU6-261P-201ENST00000459506 102 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 RPL31P50-201ENST00000471002 296 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC010587.1-201ENST00000505809 469 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC016065.2-201ENST00000514530 444 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 SNORA19.2-201ENST00000516013 114 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 SNORA40.12-201ENST00000516329 111 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 PSMA2P1-201ENST00000526365 646 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 SCOCP1-201ENST00000554676 349 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC022726.1-201ENST00000587475 207 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC234771.5-201ENST00000600161 514 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC093913.1-201ENST00000614178 329 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 U6.101-201ENST00000637707 76 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC008758.3-201ENST00000507003 1829 ntBASIC5.06□□□□□ -1.6
RNF38Q9H0F5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF38Q9H0F5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RPL23AP57-201ENST00000332361 466 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RNU6-1120P-201ENST00000362988 108 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RNU4-44P-201ENST00000363050 141 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RNU6-853P-201ENST00000364306 107 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RNU6-730P-201ENST00000383954 104 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 EIF5P1-201ENST00000400019 1231 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RNU6-1148P-201ENST00000410992 104 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 FAR2P2-201ENST00000413041 594 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 TPMTP2-201ENST00000414372 726 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 SNRPFP1-201ENST00000414761 252 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC245028.1-201ENST00000423259 256 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AL645608.4-201ENST00000423619 154 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 FAR2P4-202ENST00000425399 584 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 MTCO3P46-201ENST00000425787 232 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RPL23AP30-201ENST00000432419 501 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC104073.1-201ENST00000451988 151 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC026410.2-201ENST00000460281 156 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RPL7P22-201ENST00000466005 733 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC006967.1-201ENST00000467608 589 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC006463.2-201ENST00000473326 348 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC233702.1-201ENST00000482905 502 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 SCARNA22-201ENST00000503991 125 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 PCBP2P3-201ENST00000509726 843 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 RNU6-201P-201ENST00000517100 61 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC104986.1-201ENST00000517978 436 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 IGKV1-32-201ENST00000519290 311 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 COX6CP8-201ENST00000522620 226 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC090948.1-201ENST00000607464 549 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AL133215.3-201ENST00000609801 448 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 FAM27B-201ENST00000610601 213 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC040896.1-201ENST00000613819 479 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 MIR6853-201ENST00000619642 74 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AC068831.8-201ENST00000620171 435 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AL731566.1-201ENST00000620490 1937 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 AL592148.3-201ENST00000608771 2646 ntBASIC5.05□□□□□ -1.6
RNF38Q9H0F5 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF38Q9H0F5 AC130650.2-201ENST00000618736 2403 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.04□□□□□ -1.6
RNF38Q9H0F5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms