Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 IGHV3-29-201ENST00000604817 344 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC100827.5-201ENST00000615883 426 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AL049536.1-201ENST00000625043 744 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 AC009951.1-201ENST00000623674 2614 ntBASIC4.38□□□□□ -1.71
TRIM54Q9BYV2 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 RNA5SP307-201ENST00000362863 116 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 SNORA58B-201ENST00000364259 136 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 RNU6-1279P-201ENST00000383917 103 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 SNORA70F-201ENST00000384142 135 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 BX295541.1-201ENST00000417774 250 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 RPS12P23-201ENST00000419579 400 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 UQCRBP1-201ENST00000421129 336 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 RWDD4P2-201ENST00000426392 563 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AL589872.1-201ENST00000426602 288 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 CBX1P1-201ENST00000440184 427 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AL049734.2-201ENST00000441066 616 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 MTND1P9-201ENST00000453775 944 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 SNORD121B-201ENST00000458838 81 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 RPS27AP17-201ENST00000463344 455 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 RN7SL812P-201ENST00000493791 279 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC091133.4-201ENST00000511142 308 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 IGLV3-26-201ENST00000520756 302 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AP000827.1-201ENST00000527814 258 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC099489.2-201ENST00000574976 260 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 UBE2L4-201ENST00000587688 464 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC245014.2-201ENST00000603689 287 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC010201.1-201ENST00000605051 540 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC246785.4-201ENST00000605374 287 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC091304.9-201ENST00000612091 226 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 MIR6780A-201ENST00000615089 68 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 SNX18P1Y-201ENST00000616231 511 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AL138721.1-201ENST00000616756 179 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC002550.2-201ENST00000621246 394 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AL158801.5-201ENST00000623123 465 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AC007546.2-201ENST00000623996 360 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 AL160394.1-201ENST00000624765 724 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
TRIM54Q9BYV2 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 RNU6-114P-201ENST00000384704 105 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AL121834.1-202ENST00000404494 277 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 CCNG1P1-201ENST00000406783 885 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 RAD23BP2-201ENST00000416003 1207 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 CHIAP3-201ENST00000423668 1133 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 ISCA1P1-201ENST00000426679 387 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 MTND3P21-201ENST00000433774 331 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 MRPS18BP2-201ENST00000434310 759 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 ARL2BPP10-201ENST00000446487 531 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 MTCO3P20-201ENST00000454926 688 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 HMGB1P25-201ENST00000468402 607 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC126182.1-201ENST00000478134 357 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 RPL9P6-201ENST00000492764 598 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC012170.1-201ENST00000495139 359 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC231760.1-201ENST00000498002 260 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC108145.1-201ENST00000503770 153 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 KCTD9P5-201ENST00000504141 1170 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC006499.6-201ENST00000511169 607 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC108043.1-201ENST00000512696 574 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 RN7SKP244-201ENST00000516513 307 ntBASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TRIM54Q9BYV2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms