Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MIR591-201ENST00000385290 95 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 RNU6-796P-201ENST00000391086 107 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDX2Q99626 HNRNPDP2-201ENST00000406475 478 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 RNA5SP21-201ENST00000410917 96 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AIMP1P1-201ENST00000418670 937 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 DUTP6-201ENST00000425573 462 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AL590103.1-201ENST00000434488 307 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 HMGB3P11-201ENST00000440127 604 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC112653.1-201ENST00000443851 386 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC068135.1-201ENST00000446164 246 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC092685.1-201ENST00000447960 1243 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AL353705.4-201ENST00000449661 238 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC126121.1-201ENST00000482313 553 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.98□□□□□ -1.93
CDX2Q99626 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX2Q99626 AC133963.2-201ENST00000513686 578 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 MIR2276-201ENST00000516886 89 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.98□□□□□ -1.93
CDX2Q99626 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX2Q99626 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX2Q99626 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.98□□□□□ -1.93
CDX2Q99626 SERPINE4P-201ENST00000554978 281 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.98□□□□□ -1.93
CDX2Q99626 AC090751.1-201ENST00000566966 267 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC009977.1-201ENST00000586015 570 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX2Q99626 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.98□□□□□ -1.93
CDX2Q99626 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.98□□□□□ -1.93
CDX2Q99626 AC107308.1-201ENST00000615897 301 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 FRG1HP-204ENST00000617940 757 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 RNU6-156P-201ENST00000621869 107 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 AC092326.2-201ENST00000624772 1561 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 ZNF33CP-201ENST00000432492 2030 ntBASIC2.98□□□□□ -1.93
CDX2Q99626 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDX2Q99626 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CDX2Q99626 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.97□□□□□ -1.93
CDX2Q99626 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDX2Q99626 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDX2Q99626 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDX2Q99626 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDX2Q99626 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CDX2Q99626 Y_RNA.118-201ENST00000363300 101 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 RNA5SP391-201ENST00000363456 119 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 RNU6-1005P-201ENST00000384519 107 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 AL139039.1-201ENST00000401900 692 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 AP000567.1-201ENST00000406413 156 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 RNU4-26P-201ENST00000410270 107 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 RN7SKP223-201ENST00000410582 62 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.97□□□□□ -1.93
CDX2Q99626 MTCO1P43-201ENST00000431831 488 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.97□□□□□ -1.93
CDX2Q99626 AC089999.1-201ENST00000460336 374 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 RN7SL20P-201ENST00000488827 297 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.97□□□□□ -1.93
CDX2Q99626 AC110792.2-201ENST00000510278 224 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 AC005351.1-201ENST00000511152 786 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.97□□□□□ -1.93
CDX2Q99626 AC099778.2-201ENST00000610904 211 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 MIR6864-201ENST00000617935 70 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.97□□□□□ -1.93
CDX2Q99626 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.97□□□□□ -1.93
CDX2Q99626 AC117529.2-201ENST00000512159 2068 ntBASIC2.97□□□□□ -1.93
CDX2Q99626 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX2Q99626 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX2Q99626 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDX2Q99626 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDX2Q99626 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDX2Q99626 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDX2Q99626 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDX2Q99626 Y_RNA.40-201ENST00000362645 93 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDX2Q99626 MIR142-201ENST00000384835 87 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDX2Q99626 MIR1303-201ENST00000408625 86 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 AL135786.1-201ENST00000415892 214 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 AC073310.1-201ENST00000423226 1033 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 FABP5P3-201ENST00000437960 408 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 AC105402.2-201ENST00000438503 358 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 RNFT1P2-201ENST00000443064 757 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 NPM1P49-201ENST00000448027 714 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 AC092754.2-201ENST00000463506 460 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX2Q99626 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CDX2Q99626 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX2Q99626 SNORA76.2-201ENST00000517095 137 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX2Q99626 AC093331.1-201ENST00000521474 169 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 AC083923.1-201ENST00000523708 376 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX2Q99626 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CDX2Q99626 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.96□□□□□ -1.94
CDX2Q99626 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.96□□□□□ -1.94
CDX2Q99626 AC104229.1-201ENST00000561364 255 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 LINC00557-201ENST00000563184 1279 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX2Q99626 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.96□□□□□ -1.94
CDX2Q99626 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.96□□□□□ -1.94
CDX2Q99626 STMN1P1-201ENST00000617809 440 ntBASIC2.96□□□□□ -1.94
CDX2Q99626 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms