Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 RFC5P1-201ENST00000454419 874 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NEK1Q96PY6 AC010301.1-201ENST00000473936 355 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 AC091951.3-201ENST00000504093 246 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 TMEM248P1-201ENST00000510579 951 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NEK1Q96PY6 MIR2276-201ENST00000516886 89 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 RN7SKP60-201ENST00000516985 239 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 AP000790.1-201ENST00000528891 737 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 OR5B10P-201ENST00000532869 642 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 AC091057.2-201ENST00000602594 792 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 AC113368.1-201ENST00000603736 382 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 U7.8-201ENST00000619968 63 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 AC243312.2-201ENST00000623340 601 ntBASIC4.06□□□□□ -1.76
NEK1Q96PY6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEK1Q96PY6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NEK1Q96PY6 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NEK1Q96PY6 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.06□□□□□ -1.76
NEK1Q96PY6 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
NEK1Q96PY6 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 RNU6-251P-201ENST00000363235 104 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 RNU5D-1-201ENST00000363299 116 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 SUGT1P1-201ENST00000379514 476 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 RNU6-1226P-201ENST00000384317 107 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AL355379.1-201ENST00000405542 640 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 RN7SKP111-201ENST00000410349 271 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 Z99755.1-201ENST00000414048 380 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC092641.1-201ENST00000440229 772 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 CYCSP32-201ENST00000440548 321 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AL591719.1-201ENST00000444669 744 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 NPM1P49-201ENST00000448027 714 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC097262.1-201ENST00000452559 548 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC013828.1-201ENST00000481845 158 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEK1Q96PY6 MTCYBP16-201ENST00000509187 1129 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NEK1Q96PY6 RNU6-1225P-201ENST00000516336 65 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 IGKV2-26-201ENST00000518305 343 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 NDUFB9P3-201ENST00000521269 501 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 ARL2BPP5-201ENST00000523141 481 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC090695.1-201ENST00000561269 1222 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AL132657.2-201ENST00000564417 358 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC010928.3-201ENST00000587712 541 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 BNIP3P26-201ENST00000600827 554 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC007349.4-201ENST00000608114 532 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC005332.6-201ENST00000613178 446 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC023158.2-201ENST00000614876 543 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 MIR8058-201ENST00000615737 89 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 U73479.1-201ENST00000618062 168 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC068722.2-201ENST00000618734 544 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC244258.1-201ENST00000637553 1071 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 AC117529.2-201ENST00000512159 2068 ntBASIC4.05□□□□□ -1.76
NEK1Q96PY6 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AL157700.1-201ENST00000561973 1432 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEK1Q96PY6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC138915.3-201ENST00000562908 1389 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NEK1Q96PY6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NEK1Q96PY6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 RNU4-35P-201ENST00000362588 141 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 RNU6-560P-201ENST00000364007 108 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 RNU6-55P-201ENST00000411092 107 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 RNU6-954P-201ENST00000411355 107 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 HIGD1AP15-201ENST00000416198 280 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 Z73417.1-201ENST00000447373 778 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC008264.1-201ENST00000447612 367 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.04□□□□□ -1.76
NEK1Q96PY6 RPL23AP67-201ENST00000465341 474 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 AC021205.2-201ENST00000480069 347 ntBASIC4.04□□□□□ -1.76
NEK1Q96PY6 HIGD1AP3-201ENST00000515857 278 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms