Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC108860.1-201ENST00000484521 383 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC090453.1-201ENST00000495560 436 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 RNU6-479P-201ENST00000516348 105 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 SNORA40.15-201ENST00000516884 107 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC018552.3-201ENST00000567416 561 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 MIR5583-1-201ENST00000580941 59 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC105224.1-201ENST00000587055 421 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AL121992.2-201ENST00000606262 256 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AL138726.1-201ENST00000614873 333 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 uc_338.18-201ENST00000615451 175 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AL122126.1-201ENST00000546905 1318 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 ANAPC1P1-201ENST00000426186 2145 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC068870.3-201ENST00000625077 2536 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC114774.1-201ENST00000507410 1770 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 OR55B1P-203ENST00000641518 2602 ntBASIC6.41□□□□□ -1.38
TRIM47Q96LD4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM47Q96LD4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AL355834.1-201ENST00000556602 3965 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 SNORA62.1-201ENST00000364287 154 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 RNU6-657P-201ENST00000383904 107 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 SNORA67-201ENST00000384423 137 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 RNU11-201ENST00000387069 134 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 RNU6-952P-201ENST00000391164 108 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 CYB5AP4-201ENST00000396692 399 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 CBX1P3-201ENST00000413296 527 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AL118520.1-201ENST00000450770 291 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 RNU7-120P-201ENST00000459334 63 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC004801.2-202ENST00000463559 283 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC083982.1-201ENST00000485679 344 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 RPS27P23-201ENST00000487608 251 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 RN7SKP82-201ENST00000516786 223 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC128657.1-201ENST00000549459 145 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 SETP2-201ENST00000553886 926 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AL360012.1-201ENST00000602813 131 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 AC092747.3-201ENST00000603769 301 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 OR6R2P-201ENST00000609216 300 ntBASIC6.4□□□□□ -1.38
TRIM47Q96LD4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM47Q96LD4 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 DDX18P3-201ENST00000404856 2007 ntBASIC6.4□□□□□ -1.39
TRIM47Q96LD4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.4□□□□□ -1.39
TRIM47Q96LD4 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM47Q96LD4 AC093909.5-201ENST00000621839 1799 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM47Q96LD4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM47Q96LD4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM47Q96LD4 AP000432.2-201ENST00000624164 2048 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM47Q96LD4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM47Q96LD4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TRIM47Q96LD4 MIR133B-201ENST00000362210 119 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 MIR551A-201ENST00000385042 96 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 MIR130A-201ENST00000385274 89 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 HMGB3P7-201ENST00000400214 611 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 U3.36-201ENST00000408418 213 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 AL139156.1-201ENST00000412785 841 ntBASIC6.39□□□□□ -1.39
TRIM47Q96LD4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.39□□□□□ -1.39
TRIM47Q96LD4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms