Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AC138969.1-213ENST00000331436 462 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 RNU6-173P-201ENST00000364215 104 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 RNU1-52P-201ENST00000384190 164 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 FABP12P1-201ENST00000401911 322 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 RPL21P89-201ENST00000444021 467 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AC010460.1-201ENST00000507087 466 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 MIR3605-201ENST00000583214 100 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AP001033.2-201ENST00000609701 1003 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AC099506.2-201ENST00000623074 221 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 MIR7641-1-201ENST00000627518 61 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 FRG1DP-201ENST00000635586 771 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 CR848007.1-201ENST00000442354 1699 ntBASIC3.43□□□□□ -1.86
PKNOX2Q96KN3 AC016716.1-201ENST00000265882 708 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 RNU6-712P-201ENST00000410558 100 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AF274854.1-201ENST00000413236 615 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 Z99755.1-201ENST00000414048 380 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC004865.1-201ENST00000442276 1003 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC115115.1-201ENST00000449927 248 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 MRPL35P4-201ENST00000453682 566 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 RPL31P41-201ENST00000477967 372 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC073522.1-201ENST00000483312 377 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC008427.1-201ENST00000503102 655 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 KLRA1P-201ENST00000503499 986 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AL731537.2-201ENST00000561565 951 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 EIF5A2P1-201ENST00000564027 460 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC020914.6-201ENST00000594327 272 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AC008687.2-201ENST00000597865 520 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 AL450270.1-201ENST00000606160 391 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 MIR6840-201ENST00000611937 71 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 MIR6875-201ENST00000617506 72 ntBASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.42□□□□□ -1.86
PKNOX2Q96KN3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 MTND4P21-201ENST00000453886 1357 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 MTND5P24-201ENST00000438892 1767 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 DEFA7P-201ENST00000382676 285 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 SNORA80E-201ENST00000384744 137 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 MIR144-201ENST00000384886 86 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 HMGB3P6-201ENST00000444896 598 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 MTND2P19-201ENST00000449129 1012 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AL139109.1-201ENST00000455491 297 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 OR52A4P-202ENST00000481634 799 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 HMGB3P3-201ENST00000510526 400 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC026402.1-201ENST00000513642 170 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 HMGB1P23-201ENST00000518743 568 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC009127.3-201ENST00000570531 403 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 MIR4700-201ENST00000578311 74 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC015917.1-201ENST00000579654 510 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC090616.3-201ENST00000582184 217 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 OR4H6P-202ENST00000603819 340 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 uc_338.1-201ENST00000612113 180 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC245884.12-201ENST00000615364 59 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 CU459211.1-201ENST00000635667 749 ntBASIC3.41□□□□□ -1.86
PKNOX2Q96KN3 AC009812.4-201ENST00000569134 1805 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms