Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 RPL7P37-201ENST00000425095 738 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 RPL23AP76-201ENST00000441860 458 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 COX6CP2-201ENST00000444980 225 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 AC123904.3-201ENST00000547218 814 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 AC005951.1-201ENST00000576706 485 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 VN1R80P-201ENST00000597126 338 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 AC138915.3-201ENST00000562908 1389 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 MIR708-201ENST00000390708 88 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 RPL23AP58-201ENST00000440453 469 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 AL590399.6-201ENST00000446396 307 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 MIR5007-201ENST00000583098 95 ntBASIC1.95□□□□□ -2.1
SPG11Q96JI7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.95□□□□□ -2.1
SPG11Q96JI7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SPG11Q96JI7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SPG11Q96JI7 RNA5SP270-201ENST00000411361 118 ntBASIC1.94□□□□□ -2.1
SPG11Q96JI7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 TRIM60P13-201ENST00000432350 1283 ntBASIC1.94□□□□□ -2.1
SPG11Q96JI7 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 AC092798.1-201ENST00000458542 409 ntBASIC1.94□□□□□ -2.1
SPG11Q96JI7 AC055876.1-202ENST00000567053 138 ntBASIC1.94□□□□□ -2.1
SPG11Q96JI7 AL078603.1-201ENST00000603824 313 ntBASIC1.94□□□□□ -2.1
SPG11Q96JI7 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPG11Q96JI7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 AL356489.2-201ENST00000566968 3528 ntBASIC1.94□□□□□ -2.1
SPG11Q96JI7 AP001486.2-201ENST00000561652 5113 ntBASIC1.94□□□□□ -2.1
SPG11Q96JI7 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SPG11Q96JI7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SPG11Q96JI7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 RNU1-100P-201ENST00000365255 165 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 GAPDHP27-201ENST00000447427 1020 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 AC126182.1-201ENST00000478134 357 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 MLLT10P2-201ENST00000506434 249 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 SNORA9.3-201ENST00000516383 129 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 HMGB1P1-201ENST00000522557 636 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPG11Q96JI7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
SPG11Q96JI7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPG11Q96JI7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SPG11Q96JI7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 AC092473.1-201ENST00000441098 221 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 AC245517.2-201ENST00000442890 346 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPG11Q96JI7 ARL2BPP2-201ENST00000550907 489 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 OR4H12P-201ENST00000556269 907 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC1.93□□□□□ -2.1
SPG11Q96JI7 AL049840.6-202ENST00000603373 279 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 AC073869.7-201ENST00000640874 297 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 AL355578.1-201ENST00000607405 1328 ntBASIC1.93□□□□□ -2.1
SPG11Q96JI7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SPG11Q96JI7 FRG1BP-201ENST00000278882 761 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SPG11Q96JI7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPG11Q96JI7 RPS24P8-201ENST00000431490 402 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 RPL7P54-201ENST00000438336 674 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.92□□□□□ -2.1
SPG11Q96JI7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.92□□□□□ -2.1
SPG11Q96JI7 AC011604.1-201ENST00000545978 196 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 RPS3AP4-201ENST00000555161 764 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC1.92□□□□□ -2.1
SPG11Q96JI7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPG11Q96JI7 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 MTND5P29-201ENST00000458676 1807 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPG11Q96JI7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.92□□□□□ -2.1
SPG11Q96JI7 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPG11Q96JI7 SNORA67.3-201ENST00000384366 140 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 SNORA11.4-201ENST00000408823 129 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 AP1B1P2-201ENST00000416196 106 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.92□□□□□ -2.1
SPG11Q96JI7 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.92□□□□□ -2.1
SPG11Q96JI7 BX248123.2-201ENST00000606318 124 ntBASIC1.92□□□□□ -2.1
SPG11Q96JI7 AC245517.5-201ENST00000611529 162 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms