Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 ZNF876P-202ENST00000398732 1485 ntBASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM5Q96HC4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 RNU6-1122P-201ENST00000384449 107 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 RPL32P23-201ENST00000397237 405 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 U3.39-201ENST00000408569 239 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 RN7SKP53-201ENST00000411337 315 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 HMGB3P23-201ENST00000414981 585 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AL049610.1-201ENST00000423374 372 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 SNRPEP4-201ENST00000435815 279 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 RPS29P31-201ENST00000446147 164 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 U3.44-201ENST00000458938 192 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC007537.2-201ENST00000472093 511 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC103987.1-201ENST00000473394 348 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 COX7A2P2-201ENST00000505291 250 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 RANP9-201ENST00000519957 271 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC023161.2-201ENST00000551218 780 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 HSPE1P3-201ENST00000559254 309 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC053481.3-201ENST00000577881 843 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 MIR3160-1-201ENST00000577972 85 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 MIR4474-201ENST00000579189 78 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC008751.2-201ENST00000597885 980 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 MIR6810-201ENST00000622701 70 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AP002782.1-201ENST00000623107 614 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AP003485.2-201ENST00000623636 610 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC120349.2-201ENST00000625002 298 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 CU459211.1-201ENST00000635667 749 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 CRYM-AS1-204ENST00000637983 556 ntBASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.57□□□□□ -1.84
PDLIM5Q96HC4 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 SNRPEP3-201ENST00000338402 276 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 RN7SKP227-201ENST00000364445 330 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 RPL7P60-201ENST00000397636 735 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC091390.1-201ENST00000433904 331 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 MTND4P6-201ENST00000438297 472 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 MTATP6P26-201ENST00000445926 662 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 PTENP1-201ENST00000447117 1215 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 RPS15AP17-201ENST00000470598 390 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC012181.1-201ENST00000479895 423 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 RPS3AP50-201ENST00000487064 803 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC114981.1-201ENST00000503897 678 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC091951.3-201ENST00000504093 246 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC093534.1-201ENST00000504977 132 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 NPM1P41-201ENST00000512920 831 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AP006245.1-201ENST00000522549 120 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 HSPA8P13-201ENST00000523715 472 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 SETP7-201ENST00000552169 453 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC090695.1-201ENST00000561269 1222 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AP001269.3-201ENST00000588718 329 ntBASIC3.56□□□□□ -1.84
PDLIM5Q96HC4 AC007349.4-201ENST00000608114 532 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms