Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HLA-CQ95604 RNA5SP319-201ENST00000362768 119 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 RNY3P11-201ENST00000364153 102 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 RNU6-371P-201ENST00000364283 108 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 RNU6-187P-201ENST00000384139 106 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HLA-CQ95604 SNORA69.1-201ENST00000390904 137 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 MRPL35P1-201ENST00000404272 572 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 RPL21P38-201ENST00000418090 167 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-CQ95604 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-CQ95604 RPL7L1P9-201ENST00000431298 745 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 AC006466.1-201ENST00000438721 289 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 AC098831.1-201ENST00000440661 216 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-CQ95604 AZGP1P2-201ENST00000454506 345 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-CQ95604 RPS17P5-201ENST00000498293 408 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-CQ95604 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-CQ95604 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.23□□□□□ -1.41
HLA-CQ95604 AC091144.1-201ENST00000519573 138 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.23□□□□□ -1.41
HLA-CQ95604 OR1M4P-201ENST00000589199 287 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.23□□□□□ -1.41
HLA-CQ95604 AL034351.1-201ENST00000605288 668 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 AC243829.7-201ENST00000633081 225 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.23□□□□□ -1.41
HLA-CQ95604 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HLA-CQ95604 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
HLA-CQ95604 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HLA-CQ95604 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
HLA-CQ95604 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HLA-CQ95604 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-CQ95604 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.22□□□□□ -1.41
HLA-CQ95604 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 ENSAP1-201ENST00000392855 326 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 RNU6-121P-201ENST00000410525 99 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 Z92846.1-201ENST00000456203 268 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 RNU7-169P-201ENST00000459456 61 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 RPS21P4-201ENST00000487122 248 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 GSTP1P1-201ENST00000548078 319 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.22□□□□□ -1.41
HLA-CQ95604 MIR4436B2-201ENST00000581415 91 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 MIR4436B1-201ENST00000583272 91 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.22□□□□□ -1.41
HLA-CQ95604 AL049555.1-201ENST00000562834 1933 ntBASIC6.22□□□□□ -1.41
HLA-CQ95604 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
HLA-CQ95604 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HLA-CQ95604 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
HLA-CQ95604 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
HLA-CQ95604 AC007114.2-201ENST00000576014 4281 ntBASIC6.21□□□□□ -1.41
HLA-CQ95604 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HLA-CQ95604 RNU4-44P-201ENST00000363050 141 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 RNA5SP240-201ENST00000365355 128 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 RNU6-933P-201ENST00000384424 107 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 SNORA11-201ENST00000408789 128 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 FAR2P2-201ENST00000413041 594 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 AC092809.3-201ENST00000415453 231 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-CQ95604 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.21□□□□□ -1.42
HLA-CQ95604 AC013470.1-201ENST00000453438 462 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.21□□□□□ -1.42
HLA-CQ95604 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.21□□□□□ -1.42
HLA-CQ95604 RNA5SP116-201ENST00000516132 98 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 IGKV2-23-201ENST00000518729 323 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.21□□□□□ -1.42
HLA-CQ95604 MIR5701-3-201ENST00000578890 82 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 LRRC37A5P-203ENST00000580181 585 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 MIR5701-1-201ENST00000585138 82 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 AC068790.4-201ENST00000602474 263 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 AC007619.2-201ENST00000605743 379 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 MIR5701-2-201ENST00000615634 82 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 AL137067.2-201ENST00000621202 131 ntBASIC6.21□□□□□ -1.42
HLA-CQ95604 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms