Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 RN7SL20P-201ENST00000488827 297 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 SUMO2P5-201ENST00000506790 245 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 RN7SKP282-201ENST00000516824 299 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AP001207.1-201ENST00000524051 481 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AP003102.1-201ENST00000525638 661 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AP000790.1-201ENST00000528891 737 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC011978.2-201ENST00000569835 2054 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC005412.1-201ENST00000580812 1049 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC090330.1-201ENST00000588646 764 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC012119.1-201ENST00000603184 222 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 BNIP3P31-201ENST00000604515 566 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC002487.1-201ENST00000604565 994 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 IGHV3-29-201ENST00000604817 344 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AL009028.1-201ENST00000604895 802 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC005014.3-201ENST00000605985 190 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AP000238.1-201ENST00000608759 426 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AP005137.2-201ENST00000609238 400 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC244100.1-202ENST00000621554 382 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC098679.5-201ENST00000624394 571 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 AC084035.1-201ENST00000634543 607 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.55□□□□□ -2
RTN4IP1Q8WWV3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL359893.1-201ENST00000447628 1580 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 RNU6-629P-201ENST00000384061 103 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 RNU6-921P-201ENST00000384361 107 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 RNU6-441P-201ENST00000384545 106 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 RNVU1-14-201ENST00000384770 164 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 MIR34B-201ENST00000385076 84 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL031121.1-201ENST00000406553 254 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 MIR1250-201ENST00000408098 113 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL353678.1-201ENST00000422735 741 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC092634.2-201ENST00000428146 1010 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC114973.1-201ENST00000429057 632 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 SETP8-201ENST00000435341 628 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL136126.1-201ENST00000473603 402 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL358832.1-201ENST00000497800 389 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 RNU6-488P-201ENST00000515918 99 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 RNU6-885P-201ENST00000516607 104 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 SNORA31.26-201ENST00000517250 137 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC109635.4-202ENST00000531666 412 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 SNORD39.3-201ENST00000584451 71 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 MIR92B-201ENST00000607575 96 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC069200.1-201ENST00000609511 323 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 VN1R74P-201ENST00000613259 503 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 MIR7112-201ENST00000616126 65 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL590240.3-201ENST00000621416 943 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AL138960.2-201ENST00000625145 535 ntBASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.54□□□□□ -2
RTN4IP1Q8WWV3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 MTND5P28-201ENST00000438005 1594 ntBASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
RTN4IP1Q8WWV3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms