Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC108078.3-201ENST00000502633 489 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 HNRNPKP5-201ENST00000515300 253 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 RNU6-583P-201ENST00000516012 92 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 RNU2-27P-201ENST00000516185 142 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 RNU6-232P-201ENST00000517144 64 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AL133457.1-201ENST00000564251 987 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 ISCA1P3-201ENST00000577104 373 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC068790.5-201ENST00000602741 355 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC068722.2-201ENST00000618734 544 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AL603755.1-201ENST00000619504 163 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC018816.2-201ENST00000621460 353 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC079248.2-201ENST00000623779 326 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 OR5BR1P-201ENST00000524992 1330 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 MTCO1P14-201ENST00000441695 1559 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 AC012020.1-201ENST00000624541 1728 ntBASIC2.82□□□□□ -1.96
LINC01006Q8NI28 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.82□□□□□ -1.96
LINC01006Q8NI28 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC097504.1-201ENST00000515103 2415 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 RNU4-35P-201ENST00000362588 141 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 SNORA51.6-201ENST00000384151 125 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 ARF4P3-201ENST00000397387 509 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 EIF5P1-201ENST00000400019 1231 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 SSXP10-201ENST00000402595 565 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 USP9YP33-201ENST00000412220 421 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 HSFY4P-201ENST00000415994 1181 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 HMGB3P20-201ENST00000417997 600 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AL365203.2-201ENST00000423444 196 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC005326.1-201ENST00000429197 123 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 PSMA2P3-201ENST00000429685 675 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 USP9YP35-201ENST00000435696 412 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 RPL23AP16-201ENST00000441715 421 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 RPL39P6-201ENST00000448289 150 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AL645939.1-201ENST00000453429 797 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC099563.1-201ENST00000456086 418 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 BZW1P2-201ENST00000473537 826 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC104685.1-201ENST00000502445 371 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 XKRY-201ENST00000510392 1100 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 LTV1P1-201ENST00000510683 1237 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 ZNF705CP-201ENST00000530515 889 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC008127.2-201ENST00000549925 1075 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 LSM6P2-201ENST00000552208 177 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 CYCSP2-201ENST00000558168 301 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC109446.2-201ENST00000567872 497 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC090616.2-202ENST00000584248 222 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC011471.1-201ENST00000585766 187 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC083899.3-201ENST00000603413 594 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 Z99497.2-201ENST00000603634 310 ntBASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.81□□□□□ -1.96
LINC01006Q8NI28 AC004223.4-201ENST00000612426 332 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms