Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC095031.1-201ENST00000623685 672 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 AC091152.2-201ENST00000591628 2569 ntBASIC3.6□□□□□ -1.83
RTL3Q8N8U3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTL3Q8N8U3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 RNU6-906P-201ENST00000384700 70 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 MIR506-201ENST00000384998 124 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 MIR218-2-201ENST00000385006 110 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 MIR591-201ENST00000385290 95 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AL449283.1-202ENST00000418249 604 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC068533.1-201ENST00000418542 415 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 MTATP6P17-201ENST00000431030 672 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 BMS1P19-201ENST00000433925 393 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 RPS29P31-201ENST00000446147 164 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 ZNF886P-201ENST00000450781 723 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 SSXP4-201ENST00000451349 245 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 BTF3P5-201ENST00000457252 467 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AL139824.2-201ENST00000458731 1095 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC087312.1-201ENST00000471411 480 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 OR4G11P-201ENST00000492842 939 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC006499.5-201ENST00000505037 514 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC114322.1-201ENST00000506771 926 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 OR5B10P-201ENST00000532869 642 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 MIR3922-201ENST00000585192 84 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 BNIP3P24-201ENST00000593398 557 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AL390838.2-201ENST00000602394 274 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC012669.1-201ENST00000603209 283 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AP001330.4-201ENST00000604350 154 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC005332.6-201ENST00000613178 446 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.59□□□□□ -1.83
RTL3Q8N8U3 AC244258.1-201ENST00000637553 1071 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 MKKS-204ENST00000639674 192 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.59□□□□□ -1.83
RTL3Q8N8U3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RTL3Q8N8U3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 SNORD51-201ENST00000384320 80 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 CYCSP45-201ENST00000402289 315 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 SSR1P2-201ENST00000415208 787 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 OR1AA1P-201ENST00000419597 916 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 GLRXP1-201ENST00000423261 334 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 XKRYP1-201ENST00000423438 492 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 USP9YP31-201ENST00000431405 881 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 HMGN2P31-201ENST00000432430 273 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 XKRYP2-201ENST00000432915 492 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 RPL23AP74-201ENST00000437246 471 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 USP9YP22-201ENST00000438971 294 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AL445669.2-201ENST00000454425 421 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC007967.1-201ENST00000455422 1159 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 RPS23P3-201ENST00000470993 430 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 RPS27AP1-201ENST00000475545 471 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 ACTG1P13-201ENST00000486987 1043 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC098862.1-201ENST00000504991 413 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC105914.1-201ENST00000511798 226 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 SNRPGP16-201ENST00000533275 226 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.58□□□□□ -1.84
RTL3Q8N8U3 CCDC58P3-201ENST00000590792 430 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 CLIC4P2-201ENST00000601934 717 ntBASIC3.58□□□□□ -1.84
RTL3Q8N8U3 AL355810.1-201ENST00000614629 552 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms