Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SCUBE3Q8IX30 AC022164.1-201ENST00000568767 2673 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 RNU6-45P-201ENST00000384471 107 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 RNA5SP251-201ENST00000410614 137 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 RNU2-51P-201ENST00000410708 197 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AC096921.1-201ENST00000411661 375 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AC005077.1-201ENST00000449226 375 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AL513124.1-201ENST00000450410 614 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 SDC4P-201ENST00000453285 601 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 ACA64.4-201ENST00000459070 127 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 RN7SL269P-201ENST00000467795 305 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AP000797.2-201ENST00000475768 606 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 PPP1R11P1-201ENST00000486095 376 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AL035690.1-201ENST00000490892 383 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 RPS17P5-201ENST00000498293 408 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AC008958.1-201ENST00000511047 682 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 RNU7-200P-201ENST00000516105 62 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 Y_RNA.689-201ENST00000516589 107 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 RNA5SP340-201ENST00000517132 107 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AC069113.1-201ENST00000517763 267 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 CYCSP38-201ENST00000559840 322 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 MIR4643-201ENST00000577473 78 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AL160281.1-201ENST00000605307 311 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AC005261.2-201ENST00000593427 4258 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 AC034229.2-201ENST00000566945 2508 ntBASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SCUBE3Q8IX30 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 RNA5SP514-201ENST00000363717 111 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 RNU1-130P-201ENST00000363930 160 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AL121835.1-201ENST00000404250 354 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AL030996.1-201ENST00000411430 235 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 RPL35AP3-201ENST00000414680 288 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC007098.1-201ENST00000420122 367 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC092423.1-201ENST00000430165 186 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC127537.2-201ENST00000439258 465 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 Z95327.1-201ENST00000446082 482 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC104164.1-201ENST00000460282 590 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC004453.1-201ENST00000487895 408 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 IGKV2-38-201ENST00000517443 247 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AF186190.1-201ENST00000517470 480 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 RNU6-85P-201ENST00000605989 107 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 GNL2P1-201ENST00000451274 2190 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 ZNF285B-201ENST00000561698 1767 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 AC004158.1-201ENST00000564508 4319 ntBASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SCUBE3Q8IX30 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms