Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC010738.1-201ENST00000604970 987 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC090186.1-201ENST00000605991 572 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC092354.2-201ENST00000607786 514 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC097065.2-201ENST00000608159 533 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AL031666.3-201ENST00000609320 1006 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AL445264.1-201ENST00000621719 171 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 MIR7702-201ENST00000621931 59 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 AC091925.2-201ENST00000625059 256 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HERC6Q8IVU3 PNPT1P2-201ENST00000456768 2050 ntBASIC4.3□□□□□ -1.72
HERC6Q8IVU3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AL445523.1-201ENST00000451184 1362 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 RNU6-989P-201ENST00000362756 107 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 RPS3AP26-201ENST00000398259 784 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 RNA5SP39-201ENST00000411245 120 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AL035423.1-201ENST00000420331 213 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 USP9YP26-201ENST00000421008 661 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AL391219.1-201ENST00000422570 483 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MRPS18BP2-201ENST00000434310 759 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 HSPD1P21-201ENST00000436541 245 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC007967.1-201ENST00000455422 1159 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 BX322784.1-201ENST00000455793 1077 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 ARPC3P2-201ENST00000457786 533 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 RPS4XP10-201ENST00000465034 731 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 RN7SL293P-201ENST00000481765 281 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC106872.3-201ENST00000495104 446 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 TXNP6-201ENST00000510190 310 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC012435.1-202ENST00000568772 240 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC012417.1-201ENST00000582307 1039 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MIR5195-201ENST00000583555 115 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AC068790.5-201ENST00000602741 355 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AL451044.1-201ENST00000604867 238 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AL390208.1-201ENST00000605885 644 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MIR432-201ENST00000606207 94 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AF246928.1-201ENST00000623768 87 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 PCMTD1P7-201ENST00000634506 357 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 AL133412.1-201ENST00000380194 2992 ntBASIC4.29□□□□□ -1.72
HERC6Q8IVU3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HERC6Q8IVU3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 RNA5SP502-201ENST00000362694 119 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 RNU6-553P-201ENST00000364047 96 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 SNORD3H-201ENST00000384486 214 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 HMGB1P11-201ENST00000413899 637 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC023424.2-201ENST00000493479 777 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 PRELID3BP7-201ENST00000503606 469 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 HSPE1P23-201ENST00000509838 286 ntBASIC4.28□□□□□ -1.72
HERC6Q8IVU3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.28□□□□□ -1.72
HERC6Q8IVU3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms