Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AL158801.5-201ENST00000623123 465 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC024614.3-201ENST00000637860 256 ntBASIC5.4□□□□□ -1.54
RUFY4Q6ZNE9 AC092326.2-201ENST00000624772 1561 ntBASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 AP000542.2-201ENST00000623199 6179 ntBASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 IQCB2P-201ENST00000401788 1633 ntBASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 MTND4P23-201ENST00000447723 1363 ntBASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.4□□□□□ -1.55
RUFY4Q6ZNE9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 MAPK10-320ENST00000641462 6696 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC009951.1-201ENST00000623674 2614 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 RNY4P16-201ENST00000364768 94 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 RN7SKP106-201ENST00000410832 272 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 RNU2-62P-201ENST00000410868 191 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 BX510359.2-201ENST00000417920 305 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 RPS15AP12-201ENST00000419498 388 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 RPS15AP40-201ENST00000419621 391 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 OR4F13P-201ENST00000428478 931 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AL606489.2-201ENST00000433886 234 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC016691.1-201ENST00000441321 413 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 CEACAMP6-201ENST00000452007 574 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 SNORD121B-201ENST00000458838 81 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC073073.1-201ENST00000493920 463 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 SCARNA22-201ENST00000503991 125 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC111000.3-201ENST00000508057 576 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC010486.1-201ENST00000511793 424 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 IGLVIV-53-201ENST00000520107 367 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 OR4R1P-201ENST00000529879 463 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC123904.3-201ENST00000547218 814 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AC034105.3-201ENST00000565294 442 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 MIR4512-201ENST00000583257 77 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 FAM27B-201ENST00000610601 213 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 AL356585.4-201ENST00000623078 1229 ntBASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.39□□□□□ -1.55
RUFY4Q6ZNE9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 SNORA69-201ENST00000383895 132 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 RNU6-1158P-201ENST00000391167 107 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 MIR298-201ENST00000401212 88 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 RNA5SP345-201ENST00000410646 108 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 RNU2-15P-201ENST00000410692 191 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 FABP7P1-201ENST00000424004 391 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 MTND1P14-201ENST00000427400 950 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AL356276.2-201ENST00000435919 558 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC127537.2-201ENST00000439258 465 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 DDX3P2-201ENST00000446138 111 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 EIF4A1P11-201ENST00000451239 222 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC009963.2-201ENST00000453431 138 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC007424.1-203ENST00000554613 687 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AL049839.1-201ENST00000556151 657 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 RN7SL690P-201ENST00000582087 240 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC011477.5-201ENST00000586571 259 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC004853.1-201ENST00000604902 698 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AL136363.1-201ENST00000605349 337 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 AC009233.1-201ENST00000616477 371 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 MIR8069-1-201ENST00000616627 86 ntBASIC5.38□□□□□ -1.55
RUFY4Q6ZNE9 MIR8069-2-201ENST00000621412 86 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 178 ms