Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RNU1-75P-201ENST00000347264 129 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RNA5SP31-201ENST00000411144 127 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RN7SKP53-201ENST00000411337 315 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC109780.2-201ENST00000413467 845 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RPL21P32-201ENST00000419877 477 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RPL7P44-201ENST00000424827 742 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 MTCO1P39-201ENST00000426148 480 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AP000907.1-201ENST00000428428 510 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 MTND2P5-201ENST00000432656 1006 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 GOT2P5-201ENST00000433995 546 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 MTCYBP34-201ENST00000439552 670 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RPL17P49-201ENST00000443728 411 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RPL12P26-201ENST00000452430 487 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 SNORD105B-201ENST00000458770 79 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RPS4XP10-201ENST00000465034 731 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 FTH1P2-201ENST00000466086 412 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC023598.1-201ENST00000472521 361 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC093278.1-201ENST00000494700 600 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC096571.1-202ENST00000506634 735 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 SNORA70.19-201ENST00000516717 90 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC091163.3-201ENST00000518269 1144 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 SETP7-201ENST00000552169 453 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 VN1R83P-201ENST00000595685 445 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC080013.4-201ENST00000607624 649 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC023158.2-201ENST00000614876 543 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 U4.6-201ENST00000621618 127 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC004009.2-201ENST00000623016 728 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 OR4G11P-202ENST00000642116 1414 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
NIPAL3Q6P499 AC109315.1-201ENST00000584143 1347 ntBASIC3.16□□□□□ -1.9
NIPAL3Q6P499 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
NIPAL3Q6P499 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
NIPAL3Q6P499 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
NIPAL3Q6P499 AL513302.2-201ENST00000562313 1842 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 RNU6-1155P-201ENST00000363554 107 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 SNORA40.2-201ENST00000390847 128 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 PTMAP2-201ENST00000397627 327 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 RNU2-47P-201ENST00000410649 186 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 DBIP2-201ENST00000419076 262 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AL049610.1-201ENST00000423374 372 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 RPL23AP82-202ENST00000427528 469 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 ARF4P2-201ENST00000430209 526 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 MTCYBP31-201ENST00000438855 1122 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC005297.2-201ENST00000450430 606 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC010468.1-201ENST00000461022 817 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 CENPBD1P1-201ENST00000464061 469 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 RPS4XP22-201ENST00000480755 780 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 MIR2276-201ENST00000516886 89 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 SLC2A13P1-201ENST00000531560 322 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AL163153.1-201ENST00000554223 283 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 HIGD1AP17-201ENST00000554576 276 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 HSPE1P3-201ENST00000559254 309 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 MTND3P13-201ENST00000574391 343 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 MIR5047-201ENST00000579212 100 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC020914.6-201ENST00000594327 272 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC022146.1-201ENST00000595307 847 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AL031176.1-201ENST00000604554 466 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC104763.3-201ENST00000613765 618 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AC084824.4-201ENST00000620106 731 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 AP002907.1-201ENST00000606361 1430 ntBASIC3.15□□□□□ -1.91
NIPAL3Q6P499 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NIPAL3Q6P499 MFSD8-233ENST00000641482 4860 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms